RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 AVPI1Q5T686 147 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 FCRL6Q6DN72 434 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 SLC38A6Q8IZM9 456 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 OR2L13Q8N349 312 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 OR6M1Q8NGM8 313 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 MENTQ9BUN1 341 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 SEMA4CQ9C0C4 833 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 NRIP3Q9NQ35 241 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 STMND1H3BQB6 276 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 SPINT1O43278 529 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 SFTPBP07988 381 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 ZGLP1P0C6A0 271 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 AKR1C4P17516 323 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 ZP3P21754 424 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 GABREP78334 506 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 LTBQ06643 244 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 BAMBIQ13145 260 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 FAM122BQ7Z309 247 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 OR51T1Q8NGJ9 327 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 MFSD8Q8NHS3 518 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 DCUN1D4Q92564 292 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 PLA2G12AQ9BZM1 189 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 EIF5A2Q9GZV4 153 aaKnown RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 FGF20Q9NP95 211 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 SIRT3Q9NTG7 399 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 NOSIPQ9Y314 301 aaKnown RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 WDR90Q96KV7 1748 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 UNC13CQ8NB66 2214 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 TRBV5-3A0A0A0MS03 114 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 MAGEB4O15481 346 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 SULT1B1O43704 296 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 MT-ATP6P00846 226 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 IFNA17P01571 189 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 FASLGP48023 281 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 MZT1Q08AG7 82 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 Q499Y3 187 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 LAIR1Q6GTX8 287 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 NIPAL3Q6P499 406 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 FAM57BQ71RH2 274 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 H1FNTQ75WM6 255 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 CPEB2Q7Z5Q1 589 aaKnown RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 PXKQ7Z7A4 578 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 DUSP18Q8NEJ0 188 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 PAQR8Q8TEZ7 354 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 TSSK2Q96PF2 358 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 CHRNA9Q9UGM1 479 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 GPR55Q9Y2T6 319 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 KCNIP3Q9Y2W7 256 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 TMEM212A6NML5 194 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 ANKRD30BLA7E2S9 258 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 LEUTXA8MZ59 168 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 SIX6O95475 246 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 EPHA8P29322 1005 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 ABI3BPQ7Z7G0 1075 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 SLC43A2Q8N370 569 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 OR13C9Q8NGT0 318 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 OR4C3Q8NH37 302 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 CPT1CQ8TCG5 803 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 KCNE4Q8WWG9 221 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 PHYHIPQ92561 330 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 NKX6-2Q9C056 277 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 OR10A2Q9H208 303 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 CTSFQ9UBX1 484 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 PCDHB10Q9UN67 800 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 FAM230AA0A1W2PPH8 454 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 A0A1W2PS29 197 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 ZNF736B4DX44 427 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 IFNGR1P15260 489 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 FGF9P31371 208 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 TNK1Q13470 666 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 DYRK1AQ13627 763 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 TRIP6Q15654 476 aaKnown RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 ZIC1Q15915 447 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 FXNQ16595 210 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 MORN4Q8NDC4 146 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 STEAP2Q8NFT2 490 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 ZBTB8AQ96BR9 441 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 ATF6BQ99941 703 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 PBDC1Q9BVG4 233 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 NXF2Q9GZY0 626 aaKnown RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 OR51B6Q9H340 312 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 SLC25A19Q9HC21 320 aa10.04□□□□□ -0.8
HDAC6-228ENST00000486227 COA3Q9Y2R0 106 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-228ENST00000486227 FAM166BA8MTA8 275 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 ENPP1P22413 925 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 RPS27P42677 84 aaKnown RBP10.03□□□□□ -0.8
HDAC6-228ENST00000486227 NXPH1P58417 271 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 ALKBH1Q13686 389 aaKnown RBP10.03□□□□□ -0.8
HDAC6-228ENST00000486227 SLC35D3Q5M8T2 416 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 LIPNQ5VXI9 398 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 GUSBP11Q6P575 273 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 C17orf107Q6ZR85 190 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 ESPNLQ6ZVH7 1005 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 SLC16A14Q7RTX9 510 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 ADGRG3Q86Y34 549 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 LAT2Q9GZY6 243 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 PIGMQ9H3S5 423 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 FBXO34Q9NWN3 711 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 KCNIP1Q9NZI2 227 aa10.03□□□□□ -0.8
HDAC6-228ENST00000486227 DNAJB11Q9UBS4 358 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms