RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ZNF775Q96BV0 537 aaPredicted RBP8.29□□□□□ -1.08
TMEM39A-208ENST00000486159 LGALS12Q96DT0 336 aa8.29□□□□□ -1.08
TMEM39A-208ENST00000486159 PLPPR2Q96GM1 343 aa8.29□□□□□ -1.08
TMEM39A-208ENST00000486159 NAA50Q9GZZ1 169 aaKnown RBP8.29□□□□□ -1.08
TMEM39A-208ENST00000486159 FKRPQ9H9S5 495 aa8.29□□□□□ -1.08
TMEM39A-208ENST00000486159 LSM2Q9Y333 95 aaKnown RBP8.29□□□□□ -1.08
TMEM39A-208ENST00000486159 FREM1Q5H8C1 2179 aa8.29□□□□□ -1.08
TMEM39A-208ENST00000486159 FBN1P35555 2871 aaKnown RBP8.29□□□□□ -1.08
TMEM39A-208ENST00000486159 FLNAP21333 2647 aaKnown RBP8.29□□□□□ -1.08
TMEM39A-208ENST00000486159 TRAV36DV7A0A075B6V5 113 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 J3QL48 77 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 CLPXO76031 633 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 CNOT4O95628 575 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 PLGP00747 810 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 IGHA1P01876 353 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 HIST1H2ABP04908 130 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 CXCR1P25024 350 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 FKBP2P26885 142 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 NOS3P29474 1203 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 AGTR1P30556 359 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 LIPAP38571 399 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 CCR4P51679 360 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 WNT4P56705 351 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 FXYD6P3P58550 94 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 RAC1P63000 192 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 ACTC1P68032 377 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 ACTA1P68133 377 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 BDH1Q02338 343 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 ACSM1Q08AH1 577 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 FHL1Q13642 323 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 MFSD13AQ14CX5 517 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 MED22Q15528 200 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 ZNF74Q16587 644 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 MOGQ16653 247 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 SLC35D3Q5M8T2 416 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 LCN1P1Q5VSP4 162 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 HBMQ6B0K9 141 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 GPR139Q6DWJ6 353 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 NIPAL3Q6P499 406 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 ZNF704Q6ZNC4 412 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 USP43Q70EL4 1123 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 HIST3H2AQ7L7L0 130 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 MEX3DQ86XN8 651 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 CROCCP3Q8IVE0 287 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 CPOQ8IVL8 374 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 TUSC5Q8IXB3 177 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 LRRC75A-AS1Q8N1F1 130 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 OR6K3Q8NGY3 331 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 OR51A7Q8NH64 312 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 HIST1H2ACQ93077 130 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 PIGTQ969N2 578 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 DNAJA3Q96EY1 480 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 MRPL48Q96GC5 212 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 GMPPAQ96IJ6 420 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 TNFRSF13CQ96RJ3 184 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 COQ7Q99807 217 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 TAPBPLQ9BX59 468 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 ACTR6Q9GZN1 396 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 HINT3Q9NQE9 182 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 NANSQ9NR45 359 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 CHRNA9Q9UGM1 479 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 ZNF229Q9UJW7 825 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 HIF3AQ9Y2N7 669 aa8.28□□□□□ -1.08
TMEM39A-208ENST00000486159 IGKV1D-42A0A075B6H8 117 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 TRAV27A0A087WT01 109 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 A0A1W2PNR3 127 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 A8MVM7 634 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF814B7Z6K7 855 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 LINC01387J3KSC0 135 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ETV2O00321 342 aaPredicted RBP8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ARHGEF9O43307 516 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 OR2T1O43869 369 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 NDUFS7O75251 213 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 SYNGR4O95473 234 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 TXNDC12O95881 172 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 CH25HO95992 272 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 TSPAN19P0C672 248 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ASAH2BP0C7U1 165 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 CPEP16870 476 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF17P17021 662 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 PTNP21246 168 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ENPP1P22413 925 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 GALP22466 123 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 PSMA1P25786 263 aaKnown RBP8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 TACR3P29371 465 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ATP6V1E1P36543 226 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 CARD18P57730 90 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 KRTAP1-1Q07627 177 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ITGADQ13349 1161 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 GPR50Q13585 617 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 TPBGQ13641 420 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 TMEM176BQ3YBM2 270 aaPredicted RBP8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 TMPRSS11AQ6ZMR5 421 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 KLHL36Q8N4N3 616 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ACBD7Q8N6N7 88 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 POMGNT2Q8NAT1 580 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 GPR119Q8TDV5 335 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 S100ZQ8WXG8 99 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 AKAP1Q92667 903 aaKnown RBP eCLIP8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 S100PBPQ96BU1 408 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms