RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 OR2T12Q8NG77 320 aa14.62□□□□□ -0.07
SMC4-216ENST00000485645 BPIFA2Q96DR5 249 aa14.62□□□□□ -0.07
SMC4-216ENST00000485645 POM121L2Q96KW2 1035 aa14.62□□□□□ -0.07
SMC4-216ENST00000485645 PRRC1Q96M27 445 aa14.62□□□□□ -0.07
SMC4-216ENST00000485645 ALG12Q9BV10 488 aa14.62□□□□□ -0.07
SMC4-216ENST00000485645 A4GNTQ9UNA3 340 aa14.62□□□□□ -0.07
SMC4-216ENST00000485645 TRAV20A0A0B4J274 112 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 IGHV1-69-2A0A0G2JMI3 117 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 ELOVL7A1L3X0 281 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 C5orf49A4QMS7 147 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 WNT5AP41221 380 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 GUCA1AP43080 201 aaPredicted RBP14.61□□□□□ -0.07
SMC4-216ENST00000485645 GDI2P50395 445 aaKnown RBP14.61□□□□□ -0.07
SMC4-216ENST00000485645 ZNF81P51508 661 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 CTXN1P60606 82 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 RPL27P61353 136 aaKnown RBP14.61□□□□□ -0.07
SMC4-216ENST00000485645 ERVK-25P63136 954 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 PSG4Q00888 419 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 SCGB2A2Q13296 93 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 TSTQ16762 297 aaKnown RBP14.61□□□□□ -0.07
SMC4-216ENST00000485645 AVPI1Q5T686 147 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 FAHD2BQ6P2I3 314 aaPredicted RBP14.61□□□□□ -0.07
SMC4-216ENST00000485645 SHQ1Q6PI26 577 aaKnown RBP14.61□□□□□ -0.07
SMC4-216ENST00000485645 USP51Q70EK9 711 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 MICU2Q8IYU8 434 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 ALDH16A1Q8IZ83 802 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 ZNF101Q8IZC7 436 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 AKR7LQ8NHP1 331 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 FNDC8Q8TC99 324 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 LZICQ8WZA0 190 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 GTF3AQ92664 365 aaKnown RBP14.61□□□□□ -0.07
SMC4-216ENST00000485645 FAHD2AQ96GK7 314 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 ZNF665Q9H7R5 613 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 SAP30LQ9HAJ7 183 aa14.61□□□□□ -0.07
SMC4-216ENST00000485645 LOC100509620A0A075B734 347 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 A0A0A6YYJ9 748 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 CLDN25C9JDP6 229 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 IGHMP01871 453 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 HFEQ30201 348 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 FAM209AQ5JX71 171 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 SPATA46Q5T0L3 261 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 FAM205BPQ63HN1 556 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 ACSM5Q6NUN0 579 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 C1orf174Q8IYL3 243 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 RAB39BQ96DA2 213 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 MARS2Q96GW9 593 aaKnown RBP14.6□□□□□ -0.07
SMC4-216ENST00000485645 TIMM10BQ9Y5J6 103 aa14.6□□□□□ -0.07
SMC4-216ENST00000485645 PLSCR5A0PG75 271 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 SLC22A2O15244 555 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 SPRY3O43610 288 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 PNPP00491 289 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 CST2P09228 141 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 MAKP20794 623 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 LAP3P28838 519 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 MPV17P39210 176 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 YAP1P46937 504 aaKnown RBP14.59□□□□□ -0.07
SMC4-216ENST00000485645 PCBD1P61457 104 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 TRAM2Q15035 370 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 ANKDD1AQ495B1 522 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 MBNL2Q5VZF2 373 aaKnown RBP14.59□□□□□ -0.07
SMC4-216ENST00000485645 IGFN1Q86VF2 1251 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 TEX29Q8N6K0 151 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 CLDN22Q8N7P3 220 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 LRRC75AQ8NAA5 344 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 OR51A7Q8NH64 312 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 SLC25A40Q8TBP6 338 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 IPCEF1Q8WWN9 437 aaPredicted RBP14.59□□□□□ -0.07
SMC4-216ENST00000485645 ELMOD3Q96FG2 381 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 TIMD4Q96H15 378 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 FNDC11Q9BVV2 318 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 OR2H1Q9GZK4 316 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 OR2J1Q9GZK6 312 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 WNT5BQ9H1J7 359 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 RHCGQ9UBD6 479 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 AP3M1Q9Y2T2 418 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 WIPI2Q9Y4P8 454 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 CAPN7Q9Y6W3 813 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 NBEAL1Q6ZS30 2694 aa14.59□□□□□ -0.07
SMC4-216ENST00000485645 TRAV27A0A087WT01 109 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 A0A1W2PPL8 197 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 A6NIZ1 184 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 VENTXO95231 258 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 MPZL1O95297 269 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 IGHV1-46P01743 117 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 IFNW1P05000 195 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 MMP15P51511 669 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 RAP1BP61224 184 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 RAP1AP62834 184 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 PRKCDQ05655 676 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 THSD4Q6ZMP0 1018 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 VTCN1Q7Z7D3 282 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 OAFQ86UD1 273 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 NRMQ8IXM6 262 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 RNF113BQ8IZP6 322 aaKnown RBP14.58□□□□□ -0.08
SMC4-216ENST00000485645 OFCC1Q8IZS5 231 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 ABHD4Q8TB40 342 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 KLF14Q8TD94 323 aaPredicted RBP14.58□□□□□ -0.08
SMC4-216ENST00000485645 RAB1CQ92928 201 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 RCN3Q96D15 328 aa14.58□□□□□ -0.08
SMC4-216ENST00000485645 ELOVL3Q9HB03 270 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms