RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 A6NIZ1 184 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 CLDN25C9JDP6 229 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 VENTXO95231 258 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 PNPP00491 289 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 H2AFXP16104 143 aaPredicted RBP9.75□□□□□ -0.85
SCFD1-206ENST00000484733 IFNA8P32881 189 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 OR1E2P47887 323 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 GDI2P50395 445 aaKnown RBP9.75□□□□□ -0.85
SCFD1-206ENST00000484733 MMP15P51511 669 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 ARFIP2P53365 341 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 RAP1BP61224 184 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 RAP1AP62834 184 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 PSG4Q00888 419 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 SGCAQ16586 387 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 USP43Q70EL4 1123 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 SYT9Q86SS6 491 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 MICU2Q8IYU8 434 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 FAM156AQ8NDB6 213 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 BPIFA2Q96DR5 249 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 DIRC2Q96SL1 478 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 WNT5BQ9H1J7 359 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 TIMM10BQ9Y5J6 103 aa9.75□□□□□ -0.85
SCFD1-206ENST00000484733 J3QLI3 93 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 HAX1O00165 279 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 SLC22A2O15244 555 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 CDC14BO60729 498 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 SHOX2O60902 331 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-206ENST00000484733 CD55P08174 381 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 GCH1P30793 250 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 ZNF81P51508 661 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 PCBD1P61457 104 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 PRKCDQ05655 676 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 FMODQ06828 376 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 USP51Q70EK9 711 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 RNF113BQ8IZP6 322 aaKnown RBP9.74□□□□□ -0.85
SCFD1-206ENST00000484733 RAB1CQ92928 201 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 OR2H1Q9GZK4 316 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 ARGLU1Q9NWB6 273 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-206ENST00000484733 KLHL21Q9UJP4 597 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 ELOVL7A1L3X0 281 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 PIP5K1CO60331 668 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 IGHV1-46P01743 117 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 IGHV2-5P01817 119 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 COX5BP10606 129 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 IFI30P13284 250 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 TUBG1P23258 451 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 SLC9A3P48764 834 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 CTXN1P60606 82 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 MVKQ03426 396 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 SLC3A1Q07837 685 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 CD47Q08722 323 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 HFEQ30201 348 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 C1QL2Q7Z5L3 287 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 ALDH16A1Q8IZ83 802 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 OFCC1Q8IZS5 231 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-206ENST00000484733 OR2T12Q8NG77 320 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 AKR7LQ8NHP1 331 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 SLC25A40Q8TBP6 338 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 ZNF418Q8TF45 676 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-206ENST00000484733 NSMAFQ92636 917 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 GTF3AQ92664 365 aaKnown RBP9.74□□□□□ -0.85
SCFD1-206ENST00000484733 TIMD4Q96H15 378 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 OCEL1Q9H607 264 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 SAP30LQ9HAJ7 183 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 ELOVL3Q9HB03 270 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 LPAR2Q9HBW0 351 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 TUBG2Q9NRH3 451 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 WIPI2Q9Y4P8 454 aa9.74□□□□□ -0.85
SCFD1-206ENST00000484733 C5orf49A4QMS7 147 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 PLPP2O43688 288 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 AHCYL1O43865 530 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 MAKP20794 623 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 GATA3P23771 443 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 MPV17P39210 176 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 FHL1Q13642 323 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 TSTQ16762 297 aaKnown RBP9.73□□□□□ -0.85
SCFD1-206ENST00000484733 LRRC23Q53EV4 343 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-206ENST00000484733 TMEM255AQ5JRV8 349 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 AVPI1Q5T686 147 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 SHQ1Q6PI26 577 aaKnown RBP9.73□□□□□ -0.85
SCFD1-206ENST00000484733 C1orf229Q6ZS94 237 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-206ENST00000484733 ZNF101Q8IZC7 436 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 ICA1LQ8NDH6 482 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 KLF14Q8TD94 323 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-206ENST00000484733 IPCEF1Q8WWN9 437 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-206ENST00000484733 LZICQ8WZA0 190 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 TMPRSS13Q9BYE2 586 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 ZDHHC8Q9ULC8 765 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 TANC2Q9HCD6 1990 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 MPZL1O95297 269 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 CCNOP22674 350 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 LAP3P28838 519 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 GUCA1AP43080 201 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-206ENST00000484733 COMPP49747 757 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-206ENST00000484733 ARHGDIAP52565 204 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 PPP1CBP62140 327 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 ERVK-25P63136 954 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 GLO1Q04760 184 aa9.73□□□□□ -0.85
SCFD1-206ENST00000484733 ENDOGQ14249 297 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms