RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 MPV17P39210 176 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 RPL27P61353 136 aaKnown RBP16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 MRPS34P82930 218 aaKnown RBP16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 C10orf128Q5T292 105 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 OTPQ5XKR4 325 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 TBPL2Q6SJ96 375 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 THSD4Q6ZMP0 1018 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 ZNF730Q6ZMV8 503 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 DPPA2Q7Z7J5 298 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 OAFQ86UD1 273 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 TREML1Q86YW5 311 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 ZNF101Q8IZC7 436 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 ZNF519Q8TB69 540 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 LRRC37BQ96QE4 947 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 SEPHS2Q99611 448 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 GPR160Q9UJ42 338 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 HIF3AQ9Y2N7 669 aa16.41■□□□□ 0.22
NDUFA3-213ENST00000484103 FBN3Q75N90 2809 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 NME4O00746 187 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 MGRN1O60291 552 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 SERPINA1P01009 418 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 ZNF250P15622 560 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 RPL4P36578 427 aaKnown RBP16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 WNT5AP41221 380 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 GDI2P50395 445 aaKnown RBP16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 PSG4Q00888 419 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 TRAM2Q15035 370 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 THEM4Q5T1C6 240 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 SLC25A47Q6Q0C1 308 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 GLCCI1Q86VQ1 547 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 SLC15A3Q8IY34 581 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 HSH2DQ96JZ2 352 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 RBP7Q96R05 134 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 BCL2L14Q9BZR8 327 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 RERGLQ9H628 205 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 MAN2C1Q9NTJ4 1040 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 DECR2Q9NUI1 292 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 HIF1ANQ9NWT6 349 aa16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 STX18Q9P2W9 335 aaKnown RBP16.4■□□□□ 0.22
NDUFA3-213ENST00000484103 LOC100509620A0A075B734 347 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 B4DSR2 109 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 FFAR1O14842 300 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 RP2O75695 350 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 SNAP29O95721 258 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 GCH1P30793 250 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 RBMXP38159 391 aaKnown RBP16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 SLC9A3P48764 834 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 NUDT2P50583 147 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 ZNF774Q6NX45 483 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 RFPL4BQ6ZWI9 263 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 USP51Q70EK9 711 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 OFCC1Q8IZS5 231 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 FITM2Q8N6M3 262 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 RP9Q8TA86 221 aaKnown RBP16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 ABHD4Q8TB40 342 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 SLC25A40Q8TBP6 338 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 IPCEF1Q8WWN9 437 aaPredicted RBP16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 LIPHQ8WWY8 451 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 FAM162AQ96A26 154 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 NMD3Q96D46 503 aaKnown RBP16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 WNT5BQ9H1J7 359 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 OCEL1Q9H607 264 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 METTL17Q9H7H0 456 aaPredicted RBP16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 EMC7Q9NPA0 242 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 SLCO1C1Q9NYB5 712 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 EIF3KQ9UBQ5 218 aaKnown RBP16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 ADAM18Q9Y3Q7 739 aa16.39■□□□□ 0.21
NDUFA3-213ENST00000484103 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.38■□□□□ 0.213e-6■■■□□ 18.9
NDUFA3-213ENST00000484103 IGLV3-9A0A075B6K5 115 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 CENPBD1B2RD01 187 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 IGF2P01344 180 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 TSPAN19P0C672 248 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 GAAP10253 952 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 PRDX6P30041 224 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 GUCA1AP43080 201 aaPredicted RBP16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 GSK3BP49841 420 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 ZNF81P51508 661 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 DVL1P1P54792 670 aaPredicted RBP16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 NRN1LQ496H8 165 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 IFI44LQ53G44 452 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 TMEM255AQ5JRV8 349 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 FAHD2BQ6P2I3 314 aaPredicted RBP16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 GEMIN6Q8WXD5 167 aaKnown RBP16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 FAHD2AQ96GK7 314 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 POM121L2Q96KW2 1035 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 ALG12Q9BV10 488 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 ZNF416Q9BWM5 594 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 OR2H1Q9GZK4 316 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 OR2J1Q9GZK6 312 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 SMURF2Q9HAU4 748 aa16.38■□□□□ 0.21
NDUFA3-213ENST00000484103 A0A087WUU8 490 aa16.37■□□□□ 0.21
NDUFA3-213ENST00000484103 IGHV1-69-2A0A0G2JMI3 117 aa16.37■□□□□ 0.21
NDUFA3-213ENST00000484103 CDC42EP2O14613 210 aa16.37■□□□□ 0.21
NDUFA3-213ENST00000484103 MT-ND5P03915 603 aa16.37■□□□□ 0.21
NDUFA3-213ENST00000484103 SCG5P05408 212 aa16.37■□□□□ 0.21
NDUFA3-213ENST00000484103 MSMBP08118 114 aa16.37■□□□□ 0.21
NDUFA3-213ENST00000484103 NR2C1P13056 603 aa16.37■□□□□ 0.21
NDUFA3-213ENST00000484103 ITGA2P17301 1181 aa16.37■□□□□ 0.21
NDUFA3-213ENST00000484103 ZNF133P52736 654 aaPredicted RBP16.37■□□□□ 0.21
NDUFA3-213ENST00000484103 PRKCDQ05655 676 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms