RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 ACBD7Q8N6N7 88 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 ST6GALNAC3Q8NDV1 305 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 OR6K3Q8NGY3 331 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 OR6N2Q8NGY6 317 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 OR2T27Q8NH04 317 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 OR52N1Q8NH53 320 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 OTOSQ8NHW6 89 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 CPT1CQ8TCG5 803 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 HTRA1Q92743 480 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 TMIGD2Q96BF3 282 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 APH1AQ96BI3 265 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 OR5M11Q96RB7 305 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 AMELYQ99218 206 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 MNTQ99583 582 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 TBX5Q99593 518 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 TM9SF2Q99805 663 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 TTYH2Q9BSA4 534 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 TP63Q9H3D4 680 aaPredicted RBP7.26□□□□□ -1.25
USP4-210ENST00000483212 CRLF2Q9HC73 371 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 MALT1Q9UDY8 824 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 KCNG2Q9UJ96 466 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 SNX5Q9Y5X3 404 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 IGSF10Q6WRI0 2623 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 SHANK1Q9Y566 2161 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 A0A1W2PPL8 197 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ZNF593O00488 134 aaPredicted RBP7.25□□□□□ -1.25
USP4-210ENST00000483212 PRRG2O14669 202 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ATXN7O15265 892 aaPredicted RBP7.25□□□□□ -1.25
USP4-210ENST00000483212 SEC14L2O76054 403 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ABHD16AO95870 558 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 LALBAP00709 142 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 IGHV3-9P01782 118 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 CRHP06850 196 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 MSR1P21757 451 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ATP6V1E1P36543 226 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 RPL5P46777 297 aaKnown RBP7.25□□□□□ -1.25
USP4-210ENST00000483212 LSM6P62312 80 aaKnown RBP7.25□□□□□ -1.25
USP4-210ENST00000483212 HIST1H3AP68431 136 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 SIRPAP78324 504 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ADAM8P78325 824 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 NFATC3Q12968 1075 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 NEDD8Q15843 81 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 CEACAM16Q2WEN9 425 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 NRN1LQ496H8 165 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 SYT6Q5T7P8 510 aaPredicted RBP7.25□□□□□ -1.25
USP4-210ENST00000483212 HIST2H3PS2Q5TEC6 136 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 SLC18B1Q6NT16 456 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ZNF322Q6U7Q0 402 aaPredicted RBP7.25□□□□□ -1.25
USP4-210ENST00000483212 C3P1Q6ZMU1 363 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 HIST2H3AQ71DI3 136 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ZNF367Q7RTV3 350 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 DPY19L4Q7Z388 723 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 SYS1Q8N2H4 156 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 GPR137CQ8N3F9 429 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 OR10H4Q8NGA5 316 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 OR10S1Q8NGN2 331 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 OR13F1Q8NGS4 319 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ST7LQ8TDW4 575 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 FCGR1BQ92637 280 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 KCTD12Q96CX2 325 aaKnown RBP7.25□□□□□ -1.25
USP4-210ENST00000483212 STARD4Q96DR4 205 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 COG8Q96MW5 612 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ZFP3Q96NJ6 502 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 DMRTA2Q96SC8 542 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 FOXB1Q99853 325 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ALG8Q9BVK2 526 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 MND1Q9BWT6 205 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 NELFAQ9H3P2 528 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 C12orf49Q9H741 205 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 ISG20L2Q9H9L3 353 aaKnown RBP7.25□□□□□ -1.25
USP4-210ENST00000483212 EMC7Q9NPA0 242 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 B3GAT2Q9NPZ5 323 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 PLSCR4Q9NRQ2 329 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 TMEM38BQ9NVV0 291 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 CYB5R1Q9UHQ9 305 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 TINAGQ9UJW2 476 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 EMC9Q9Y3B6 208 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 LHFPL6Q9Y693 200 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 SPTA1P02549 2419 aa7.25□□□□□ -1.25
USP4-210ENST00000483212 DAPL1A0PJW8 107 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 A6NHS1 94 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 ZNF99A8MXY4 864 aaPredicted RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 ZNF670-ZNF695F2Z2N8 137 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 MYL12BO14950 172 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 MAGEB4O15481 346 aaPredicted RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 CNOT4O95628 575 aaKnown RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 IL18BPO95998 194 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 HLA-DQA2P01906 255 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 ITGA5P08648 1049 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 SPARCP09486 303 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 TMIGD3P0DMS9 266 aaPredicted RBP7.24□□□□□ -1.25
USP4-210ENST00000483212 MYL12AP19105 171 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 NPR2P20594 1047 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 TGFBR2P37173 567 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 ZNF84P51523 738 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 WNT4P56705 351 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 ROM1Q03395 351 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 RBPJQ06330 500 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 ACSM1Q08AH1 577 aa7.24□□□□□ -1.25
USP4-210ENST00000483212 RAB39AQ14964 217 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms