RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 CD226Q15762 336 aa16.32■□□□□ 0.2
SSR4-209ENST00000482902 SMAD2Q15796 467 aaKnown RBP16.32■□□□□ 0.2
SSR4-209ENST00000482902 ALG10Q5BKT4 473 aa16.32■□□□□ 0.2
SSR4-209ENST00000482902 C10orf91Q5T1B1 145 aa16.32■□□□□ 0.2
SSR4-209ENST00000482902 YOD1Q5VVQ6 348 aaPredicted RBP16.32■□□□□ 0.2
SSR4-209ENST00000482902 FAM122BQ7Z309 247 aa16.32■□□□□ 0.2
SSR4-209ENST00000482902 PARGQ86W56 976 aa16.32■□□□□ 0.2
SSR4-209ENST00000482902 BEST3Q8N1M1 668 aa16.32■□□□□ 0.2
SSR4-209ENST00000482902 ZNF615Q8N8J6 731 aa16.32■□□□□ 0.2
SSR4-209ENST00000482902 C2CD4CQ8TF44 421 aa16.32■□□□□ 0.2
SSR4-209ENST00000482902 MRM2Q9UI43 246 aaKnown RBP16.32■□□□□ 0.2
SSR4-209ENST00000482902 LRP4O75096 1905 aa16.32■□□□□ 0.2
SSR4-209ENST00000482902 H0YC42 278 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 OR2F2O95006 317 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 PNMTP11086 282 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 CSRP1P21291 193 aaKnown RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 SOX2P48431 317 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 LTBQ06643 244 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 OR2F1Q13607 317 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 LIPNQ5VXI9 398 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 GLT8D1Q68CQ7 371 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 ATG4DQ86TL0 474 aaPredicted RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 LRRC75AQ8NAA5 344 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 OR5AK2Q8NH90 309 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 VRK1Q99986 396 aaPredicted RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 ZNF471Q9BX82 626 aaPredicted RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 SLITRK2Q9H156 845 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 ALX4Q9H161 411 aaPredicted RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 S1PR5Q9H228 398 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 POFUT1Q9H488 388 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 SRA1Q9HD15 236 aaKnown RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 ASF1BQ9NVP2 202 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 MYEF2Q9P2K5 600 aaKnown RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 LHX6Q9UPM6 363 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 SPTY2D1-AS1A0A0U1RR47 76 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 RNF222A6NCQ9 220 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 OR5H14A6NHG9 310 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 SRPX2O60687 465 aaPredicted RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 UPK3AO75631 287 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 F13BP05160 661 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 CRYBA1P05813 215 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 AKAIN1P0CW23 69 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 GTF2F2P13984 249 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 HPGDP15428 266 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 CSF2RBP32927 897 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 ALKBH1Q13686 389 aaKnown RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 FZD2Q14332 565 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 SHHQ15465 462 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 SWI5Q1ZZU3 235 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 Q499Y3 187 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 MED25Q71SY5 747 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 LRRTM1Q86UE6 522 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 EXD3Q8N9H8 876 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 PHOSPHO1Q8TCT1 267 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 MMABQ96EY8 250 aaPredicted RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 CLEC1BQ9P126 229 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 EDARQ9UNE0 448 aa16.31■□□□□ 0.2
SSR4-209ENST00000482902 CARHSP1Q9Y2V2 147 aaKnown RBP16.31■□□□□ 0.2
SSR4-209ENST00000482902 A0A1B0GTI1 187 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 BLACEA4D250 179 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 ITGB2P05107 769 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 THEGLP0DJG4 465 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 SDHAP31040 664 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 DLX2Q07687 328 aaPredicted RBP16.3■□□□□ 0.2
SSR4-209ENST00000482902 CBLN3Q6UW01 205 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 TMPRSS12Q86WS5 348 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 SPAG16Q8N0X2 631 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 FRRS1LQ9P0K9 344 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 GPN3Q9UHW5 284 aaPredicted RBP16.3■□□□□ 0.2
SSR4-209ENST00000482902 MKL2Q9ULH7 1088 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 NOSIPQ9Y314 301 aaKnown RBP16.3■□□□□ 0.2
SSR4-209ENST00000482902 HEATR5AQ86XA9 2040 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 TVP23AA6NH52 213 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 H7C1C5 153 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 DCTN6O00399 190 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 AKR7A3O95154 331 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 NSA2O95478 260 aaKnown RBP16.3■□□□□ 0.2
SSR4-209ENST00000482902 CLPSP04118 112 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 CD3DP04234 171 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 OR4E1P0C645 316 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 LCN6P62502 163 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 BEX5Q5H9J7 111 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 AVPI1Q5T686 147 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 STEAP2Q8NFT2 490 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 THAP6Q8TBB0 222 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 NANPQ8TBE9 248 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 MRPL38Q96DV4 380 aaKnown RBP16.3■□□□□ 0.2
SSR4-209ENST00000482902 CCNL2Q96S94 520 aaPredicted RBP16.3■□□□□ 0.2
SSR4-209ENST00000482902 MAP3K3Q99759 626 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 MMP25Q9NPA2 562 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 ZNF629Q9UEG4 869 aaPredicted RBP16.3■□□□□ 0.2
SSR4-209ENST00000482902 PRODH2Q9UF12 536 aa16.3■□□□□ 0.2
SSR4-209ENST00000482902 MEX3AA1L020 520 aaKnown RBP16.29■□□□□ 0.2
SSR4-209ENST00000482902 MEIS3P1A6NDR6 274 aa16.29■□□□□ 0.2
SSR4-209ENST00000482902 GGT3PA6NGU5 568 aa16.29■□□□□ 0.2
SSR4-209ENST00000482902 PMS2P2O95744 297 aa16.29■□□□□ 0.2
SSR4-209ENST00000482902 ACTL6AO96019 429 aa16.29■□□□□ 0.2
SSR4-209ENST00000482902 SLC25A4P12235 298 aa16.29■□□□□ 0.2
SSR4-209ENST00000482902 APEHP13798 732 aaKnown RBP16.29■□□□□ 0.2
SSR4-209ENST00000482902 FNDC7Q5VTL7 733 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms