RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 RNF165Q6ZSG1 346 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 LANCL3Q6ZV70 420 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 PAQR9Q6ZVX9 377 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 ZNF551Q7Z340 670 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 THOC6Q86W42 341 aaKnown RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 LSRQ86X29 649 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 PTOV1Q86YD1 416 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 BAP18Q8IXM2 172 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 RTL3Q8N8U3 475 aaKnown RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 C19orf47Q8N9M1 422 aaKnown RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 UBAC2Q8NBM4 344 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 OR9Q2Q8NGE9 314 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 OR8J3Q8NGG0 315 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 OR13C8Q8NGS7 320 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 OR2T35Q8NGX2 323 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 COQ8AQ8NI60 647 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 HMGCLL1Q8TB92 370 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 ZNF675Q8TD23 568 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 RNASEH2CQ8TDP1 164 aaKnown RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 FAM222BQ8WU58 562 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 EXT2Q93063 718 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 NT5C3BQ969T7 300 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 PHF21BQ96EK2 531 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 SMIM12Q96EX1 92 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 SMARCD1Q96GM5 515 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 C12orf66Q96MD2 445 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 ZNF48Q96MX3 618 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 CLUHP3Q96NS8 147 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 OR2A7Q96R45 310 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 OR6C1Q96RD1 312 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 IFT27Q9BW83 186 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 GATA5Q9BWX5 397 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 ASPNQ9BXN1 380 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 ACTR3CQ9C0K3 210 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 MEAF6Q9HAF1 191 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 TPT1P8Q9HAU6 139 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 CSNK1G1Q9HCP0 422 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 SLC6A20Q9NP91 592 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 EXOSC3Q9NQT5 275 aaKnown RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 GPR173Q9NS66 373 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 TMEM248Q9NWD8 314 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 H2AFY2Q9P0M6 372 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 RCC2Q9P258 522 aaKnown RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 TMEFF2Q9UIK5 374 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 NAGKQ9UJ70 344 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 ZNF222Q9UK12 451 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 IKZF3Q9UKT9 509 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 SAMD4AQ9UPU9 718 aaKnown RBP4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 CLDN16Q9Y5I7 305 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 STYXL1Q9Y6J8 313 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 CLCA3PQ9Y6N3 262 aa4.83□□□□□ -1.64
TRAPPC10-209ENST00000481460 hCG_1818297A0A087WSY0 165 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 TMEM269A0A1B0GVZ9 245 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 A0A1W2PQH9 124 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 TMEM89A2RUT3 159 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 OR2M5A3KFT3 312 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 GSAPA4D1B5 854 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 LRIT2A6NDA9 550 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 FAM90A27PA6NNH2 459 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 ZNF587BE7ETH6 402 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 CLDN5O00501 218 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 BHLHE40O14503 412 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 EIF3DO15371 548 aaKnown RBP eCLIP4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 CYTIPO60759 359 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 DNAJB6O75190 326 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 AP2A2O94973 939 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 CLDN9O95484 217 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 CALCAP01258 141 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 IGF2P01344 180 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 MT-ND5P03915 603 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 ALDOAP04075 364 aaKnown RBP4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 PRR35P0CG20 571 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 SLC35E2BP0CK96 405 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 SLC35E2P0CK97 266 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 RPA2P15927 270 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 MGMTP16455 207 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 CXCL2P19875 107 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 HTR2CP28335 458 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 SDC4P31431 198 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 GPR4P46093 362 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 GSK3BP49841 420 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 PPT1P50897 306 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 MECP2P51608 486 aaKnown RBP4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 AGFG1P52594 562 aaKnown RBP4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 SEC61A1P61619 476 aaKnown RBP4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 MRPS10P82664 201 aaKnown RBP4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 FMO1Q01740 532 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 SPOCK1Q08629 439 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 VEZF1Q14119 521 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 NFATC4Q14934 902 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 MLC1Q15049 377 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 SNRNP35Q16560 246 aaKnown RBP4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 BSXQ3C1V8 233 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 C2orf76Q3KRA6 126 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 AGKQ53H12 422 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 ZNF311Q5JNZ3 666 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 TMEM255AQ5JRV8 349 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 SIRPB2Q5JXA9 342 aa4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 OTUD3Q5T2D3 398 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC10-209ENST00000481460 H3F3CQ6NXT2 135 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms