RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 IRF3Q14653 427 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 KCTD21Q4G0X4 260 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 LCN1P1Q5VSP4 162 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 TMEM211Q6ICI0 200 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 DNM1P34Q6PK57 102 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 AHSA2Q719I0 299 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.49□□□□□ -0.57
CHD3-210ENST00000479080 ATCAYQ86WG3 371 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 ERI1Q8IV48 349 aaKnown RBP11.49□□□□□ -0.57
CHD3-210ENST00000479080 UBE2J2Q8N2K1 259 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 ZNF433Q8N7K0 673 aaPredicted RBP11.49□□□□□ -0.57
CHD3-210ENST00000479080 OR10S1Q8NGN2 331 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 OR1K1Q8NGR3 316 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 BCL2L2Q92843 193 aaPredicted RBP11.49□□□□□ -0.57
CHD3-210ENST00000479080 RFKQ969G6 155 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 ZNF696Q9H7X3 374 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 B3GAT2Q9NPZ5 323 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 CNOT2Q9NZN8 540 aaKnown RBP11.49□□□□□ -0.57
CHD3-210ENST00000479080 H2AFY2Q9P0M6 372 aaPredicted RBP11.49□□□□□ -0.57
CHD3-210ENST00000479080 ZNF629Q9UEG4 869 aaPredicted RBP11.49□□□□□ -0.57
CHD3-210ENST00000479080 KCNG2Q9UJ96 466 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHD3-210ENST00000479080 RPL36Q9Y3U8 105 aaKnown RBP11.49□□□□□ -0.57
CHD3-210ENST00000479080 EIF4E1BA6NMX2 242 aaKnown RBP11.48□□□□□ -0.57
CHD3-210ENST00000479080 A8MXE2 369 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 MSTNO14793 375 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 LYZL6O75951 148 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 CNOT4O95628 575 aaKnown RBP11.48□□□□□ -0.57
CHD3-210ENST00000479080 HRGP04196 525 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 CDK1P06493 297 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 LYNP07948 512 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 PATE4P0C8F1 98 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 LIMS3P0CW19 117 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 LIMS4P0CW20 117 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 C21orf33P30042 268 aaPredicted RBP11.48□□□□□ -0.57
CHD3-210ENST00000479080 OPRM1P35372 400 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 CENPAP49450 140 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 GLO1Q04760 184 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 TEX30Q5JUR7 227 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 SLC16A9Q7RTY1 509 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 LUZP2Q86TE4 346 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 CXorf67Q86X51 503 aaPredicted RBP11.48□□□□□ -0.57
CHD3-210ENST00000479080 LINC00346Q8IVM7 164 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 SKA3Q8IX90 412 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 OR6N2Q8NGY6 317 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 PRR7Q8TB68 274 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 FBXO17Q96EF6 278 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 NR1H4Q96RI1 486 aaPredicted RBP11.48□□□□□ -0.57
CHD3-210ENST00000479080 CNN2Q99439 309 aaKnown RBP11.48□□□□□ -0.57
CHD3-210ENST00000479080 TBX5Q99593 518 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 SH3GL3Q99963 347 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 ZNF416Q9BWM5 594 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 JAM3Q9BX67 310 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 YTHDF1Q9BYJ9 559 aaKnown RBP11.48□□□□□ -0.57
CHD3-210ENST00000479080 SEC61A2Q9H9S3 476 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 UPB1Q9UBR1 384 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 ERRFI1Q9UJM3 462 aaPredicted RBP11.48□□□□□ -0.57
CHD3-210ENST00000479080 DIMT1Q9UNQ2 313 aaKnown RBP11.48□□□□□ -0.57
CHD3-210ENST00000479080 NBASA2RRP1 2371 aa11.48□□□□□ -0.57
CHD3-210ENST00000479080 ZNF462Q96JM2 2506 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 INTS1Q8N201 2190 aaKnown RBP11.47□□□□□ -0.57
CHD3-210ENST00000479080 A0A096LPE4 126 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 A0A1W2PPZ6 126 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 TRIM64CA6NLI5 447 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 PTGES3LE9PB15 166 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 MAGEB4O15481 346 aaPredicted RBP11.47□□□□□ -0.57
CHD3-210ENST00000479080 MMP7P09237 267 aaPredicted RBP11.47□□□□□ -0.57
CHD3-210ENST00000479080 RNF224P0DH78 156 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 NR2C1P13056 603 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 MSR1P21757 451 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 ANOS1P23352 680 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 ENTPD1P49961 510 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 ZNF84P51523 738 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 GABARAPL2P60520 117 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 HIST1H3AP68431 136 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 ST3GAL4Q11206 333 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 RAB40BQ12829 278 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 GABRA6Q16445 453 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 SGCAQ16586 387 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 HIKESHIQ53FT3 197 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 ZNF684Q5T5D7 378 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 HIST2H3PS2Q5TEC6 136 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 SLC18B1Q6NT16 456 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 CORO6Q6QEF8 472 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 STAC2Q6ZMT1 411 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 ZNF813Q6ZN06 617 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 CFAP77Q6ZQR2 320 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 C22orf34Q6ZV56 151 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 HIST2H3AQ71DI3 136 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 DPY19L4Q7Z388 723 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 SLC35F2Q8IXU6 374 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 SLC22A24Q8N4F4 322 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 WDR31Q8NA23 367 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 ZNF540Q8NDQ6 660 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 ST7LQ8TDW4 575 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 RNF166Q96A37 237 aaPredicted RBP11.47□□□□□ -0.57
CHD3-210ENST00000479080 BOD1Q96IK1 185 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 MAP6Q96JE9 813 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 INTS14Q96SY0 518 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms