RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PHF13Q86YI8 300 aaPredicted RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SKA3Q8IX90 412 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 DEFB106AQ8N104 65 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SVOPLQ8N434 492 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 EIF1ADQ8N9N8 165 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 OR4D9Q8NGE8 314 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 WFDC5Q8TCV5 224 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 NDRG1Q92597 394 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 NTAN1Q96AB6 310 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 HAVCR1Q96D42 359 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 TMA16Q96EY4 203 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 TMEM43Q9BTV4 400 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SPATA16Q9BXB7 569 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SRXN1Q9BYN0 137 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SGK2Q9HBY8 427 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 TMEM9BQ9NQ34 198 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 NANSQ9NR45 359 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 ABCB10Q9NRK6 738 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF275Q9NSD4 429 aaPredicted RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SAMSN1Q9NSI8 373 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 DDIT4Q9NX09 232 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 ABCD2Q9UBJ2 740 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 WARS2Q9UGM6 360 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SUN2Q9UH99 717 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 CELA1Q9UNI1 258 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 ERVW-1Q9UQF0 538 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 CA5BQ9Y2D0 317 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 V9GYY5 206 aaPredicted RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 KMT2BQ9UMN6 2715 aaPredicted RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 CACNA1BQ00975 2339 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 UNC13CQ8NB66 2214 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SNRNP200O75643 2136 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 PCM1Q15154 2024 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SPTBN2O15020 2390 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 ASXL3Q9C0F0 2248 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 E7ESA3 106 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 PALMO75781 387 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 SERF1AO75920 110 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 IGHV3-23P01764 117 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 SEMG1P04279 462 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 RHOCP08134 193 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 P0C879 139 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 PNMA6AP0CW24 399 aaPredicted RBP2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 SDC4P31431 198 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 CD70P32970 193 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 UGT1A3P35503 534 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 GCKP35557 465 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 CSKP41240 450 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 MAP3K8P41279 467 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 CEBPDP49716 269 aaPredicted RBP2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 RPS14P62263 151 aaKnown RBP2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 RPS24P62847 133 aaKnown RBP2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF33AQ06730 810 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 RIPK1Q13546 671 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 KIAA0040Q15053 153 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 SF3A2Q15428 464 aaKnown RBP2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 AANATQ16613 207 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 LRRC36Q1X8D7 754 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 FILIP1LQ4L180 1135 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 SFT2D3Q587I9 215 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 SYPL2Q5VXT5 272 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 C22orf39Q6P5X5 142 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 LRRC31Q6UY01 552 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 CATSPER1Q8NEC5 780 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 CCDC112Q8NEF3 446 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 OR5D13Q8NGL4 314 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 TCTEX1D2Q8WW35 142 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 OR8D1Q8WZ84 308 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 FGGYQ96C11 551 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 NOL4LQ96MY1 436 aaPredicted RBP2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 RPRD1AQ96P16 312 aaPredicted RBP2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZBTB18Q99592 522 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 NUP58Q9BVL2 599 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 PARD6BQ9BYG5 372 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 CHIAQ9BZP6 476 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZYG11BQ9C0D3 744 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 MAGT1Q9H0U3 335 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 ACP6Q9NPH0 428 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 PRSS16Q9NQE7 514 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 ONECUT1Q9UBC0 465 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 KLHL21Q9UJP4 597 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 PTBP2Q9UKA9 531 aaKnown RBP2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 CLEC4EQ9ULY5 219 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 MOKQ9UQ07 419 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 NEU3Q9UQ49 428 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 HS3ST2Q9Y278 367 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 OR51B4Q9Y5P0 310 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 IKBKGQ9Y6K9 419 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 ACACAQ13085 2346 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 KNTC1P50748 2209 aa2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 TPRP12270 2363 aaKnown RBP2.92□□□□□ -1.94
CDC42BPA-212ENST00000478573 ACACBO00763 2458 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 IGHV1OR15-1A0A075B7D0 117 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 IGHV7-81A0A0B4J1V7 117 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 GOLGA6L7A0A1B0GV03 622 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 SIGLEC16A6NMB1 481 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF208O43345 1280 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 CXCL13O43927 109 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 DFNA5O60443 496 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 HCN1O60741 890 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms