RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 FAM222AQ5U5X8 452 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 TEX43Q6ZNM6 134 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 KDM8Q8N371 416 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 SLC35G3Q8N808 338 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 ZNF557Q8N988 423 aaPredicted RBP0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 EFHD2Q96C19 240 aaPredicted RBP0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 CLCC1Q96S66 551 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 P2RX4Q99571 388 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 THAP9Q9H5L6 903 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 NHEJ1Q9H9Q4 299 aaPredicted RBP0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 FAM49BQ9NUQ9 324 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 TERF2IPQ9NYB0 399 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 ATP6V0A2Q9Y487 856 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 ADGRA3Q8IWK6 1321 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 CAMTA1Q9Y6Y1 1673 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 REM1O75628 298 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 LCA5LO95447 670 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 LHBP01229 141 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 PSMB5P28074 263 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 GNA11P29992 359 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 EPS15P42566 896 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 GALR1P47211 349 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 PRLHRP49683 370 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 CDK5Q00535 292 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 CDH17Q12864 832 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 C1orf61Q13536 156 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 DMC1Q14565 340 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 MAD2L1BPQ15013 274 aaPredicted RBP0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 SPECC1LQ69YQ0 1117 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 MED27Q6P2C8 311 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 STK40Q8N2I9 435 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 METTL13Q8N6R0 699 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 LKAAEAR1Q8TD35 194 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 TMEM54Q969K7 222 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 PTX4Q96A99 478 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 CXorf40BQ96DE9 158 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 CCDC43Q96MW1 224 aaKnown RBP0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 TTC25Q96NG3 672 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 NPY6RQ99463 290 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 RBBP8Q99708 897 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 TCHPQ9BT92 498 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 SLC2A8Q9NY64 477 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 MTRRQ9UBK8 725 aa0.25□□□□□ -2.37
NCKAP1-204ENST00000477988 GBF1Q92538 1859 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 ZBED9Q6R2W3 1325 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 A0A0B4J2A0 478 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 HMGB1P1B2RPK0 211 aaPredicted RBP0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 PHGR1C9JFL3 82 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 F6UB75 175 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 POLR2DO15514 142 aaKnown RBP0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 MED7O43513 233 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 HSP90AA1P07900 732 aaKnown RBP0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 CYP2F1P24903 491 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 ZNF92Q03936 586 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 RCAN2Q14206 197 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 TEX30Q5JUR7 227 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 CPTPQ5TA50 214 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 ANKRD22Q5VYY1 191 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 TCF24Q7RTU0 167 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 LHFPL3Q86UP9 236 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 FAM133AQ8N9E0 248 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 OR2G2Q8NGZ5 317 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 ZNF502Q8TBZ5 544 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 C4orf36Q96KX1 117 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 SORT1Q99523 831 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 MARVELD1Q9BSK0 173 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 MRPL13Q9BYD1 178 aaKnown RBP0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 DSN1Q9H410 356 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 ELOVL3Q9HB03 270 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 EXOSC4Q9NPD3 245 aaKnown RBP0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 SHPKQ9UHJ6 478 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 AURKCQ9UQB9 309 aa0.24□□□□□ -2.37
NCKAP1-204ENST00000477988 TRAV19A0A0A6YYK7 116 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 ZNF73O43830 326 aaPredicted RBP0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 IGLV7-43P04211 117 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 ACSM4P0C7M7 580 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 P0DMU3 169 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 FAM231AP0DMU4 169 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 FAM231CP0DMU5 169 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 NTF3P20783 257 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 ATP5C1P36542 298 aaKnown RBP0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 PPIL2Q13356 520 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 GAMTQ14353 236 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 ZNF141Q15928 474 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 PGGHGQ32M88 737 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 KLHL12Q53G59 568 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 C1orf220Q5T0J3 134 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 ISLR2Q6UXK2 745 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 CCDC80Q76M96 950 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 CCDC50Q8IVM0 306 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 NKAIN3Q8N8D7 197 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 OR5T1Q8NG75 326 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 UBE2E3Q969T4 207 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 C7orf34Q96L11 122 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 OR8B4Q96RC9 309 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 HSD17B10Q99714 261 aaKnown RBP0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 SH3GL3Q99963 347 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 FICDQ9BVA6 458 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 DUSP21Q9H596 190 aa0.23□□□□□ -2.37
NCKAP1-204ENST00000477988 LINC00574Q9H8X3 128 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms