RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SNAP29O95721 258 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 CBR1P16152 277 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 CDAP32320 146 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 AQP4P55087 323 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 FXYD6P3P58550 94 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 TNK1Q13470 666 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 SMARCD3Q6STE5 483 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 ZNF620Q6ZNG0 422 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 ZNF627Q7L945 461 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 SSX8Q7RTT4 187 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 ZNF584Q8IVC4 421 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 NOXO1Q8NFA2 376 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 OR52L1Q8NGH7 329 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 FANK1Q8TC84 345 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 ADAD1Q96M93 576 aaKnown RBP15.29■□□□□ 0.04
PTPN7-209ENST00000477554 GABARAPL3Q9BY60 117 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 TOR3AQ9H497 397 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 RIBC2Q9H4K1 309 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 OBP2BQ9NPH6 170 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 IL20RAQ9UHF4 553 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 ADAM18Q9Y3Q7 739 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 CDH10Q9Y6N8 788 aa15.29■□□□□ 0.04
PTPN7-209ENST00000477554 CR1P17927 2039 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 A0A1W2PRG6 482 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 MCIDASD6RGH6 385 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 H7C1C5 153 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 DLGAP1O14490 977 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 DHHO43323 396 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 NDUFB2O95178 105 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 ACADSP16219 412 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 ZNF14P17017 642 aaPredicted RBP15.28■□□□□ 0.04
PTPN7-209ENST00000477554 GIPRP48546 466 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 CRISP1P54107 249 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 LCN6P62502 163 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 ZIK1Q3SY52 487 aaPredicted RBP15.28■□□□□ 0.04
PTPN7-209ENST00000477554 SLC36A3Q495N2 470 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 ALG10Q5BKT4 473 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 OTPQ5XKR4 325 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 DHRSXQ8N5I4 330 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 ZNF555Q8NEP9 628 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 TEX47Q8TBZ9 253 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 ZNF184Q99676 751 aaPredicted RBP15.28■□□□□ 0.04
PTPN7-209ENST00000477554 OR52D1Q9H346 318 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 CBLN4Q9NTU7 201 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 TMEM38BQ9NVV0 291 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 ZNF346Q9UL40 294 aaKnown RBP15.28■□□□□ 0.04
PTPN7-209ENST00000477554 UGT2A1Q9Y4X1 527 aa15.28■□□□□ 0.04
PTPN7-209ENST00000477554 ARHGEF9O43307 516 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 SOX14O95416 240 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 IGHG1P01857 330 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 TP53P04637 393 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-209ENST00000477554 POU1F1P28069 291 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 CLRN1P58418 232 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 CTXN1P60606 82 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 RAB39AQ14964 217 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 TTC23Q5W5X9 447 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 PRSS57Q6UWY2 283 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 THSD4Q6ZMP0 1018 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 SLC22A24Q8N4F4 322 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 PAQR4Q8N4S7 273 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-209ENST00000477554 NSMAFQ92636 917 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 FBXO17Q96EF6 278 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 C18orf12Q96KH6 178 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 COX4I2Q96KJ9 171 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 KATNB1Q9BVA0 655 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 TEX12Q9BXU0 123 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 EGLN3Q9H6Z9 239 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 B3GAT2Q9NPZ5 323 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 CA10Q9NS85 328 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 TBC1D23Q9NUY8 699 aa15.27■□□□□ 0.04
PTPN7-209ENST00000477554 NIPBLQ6KC79 2804 aaeCLIP15.27■□□□□ 0.04
PTPN7-209ENST00000477554 RTTNQ86VV8 2226 aa15.27■□□□□ 0.03
PTPN7-209ENST00000477554 SCG5P05408 212 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 INHBBP09529 407 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 CCL2P13500 99 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 HOXB1P14653 301 aaPredicted RBP15.26■□□□□ 0.03
PTPN7-209ENST00000477554 SLC6A6P31641 620 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 THBS4P35443 961 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 ERVK-25P63136 954 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 ADIPOQQ15848 244 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 SWI5Q1ZZU3 235 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 GSG1Q2KHT4 349 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 AGAP6Q5VW22 663 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 KRT80Q6KB66 452 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 FBXL14Q8N1E6 418 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 ZNF519Q8TB69 540 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 SAMD8Q96LT4 415 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 MBOAT4Q96T53 435 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 KCNK17Q96T54 332 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 ADI1Q9BV57 179 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 GRIP2Q9C0E4 1043 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 TXNIPQ9H3M7 391 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 FAM118AQ9NWS6 357 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 H0YAE9 185 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 SLC16A6O15403 523 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 SSX4O60224 188 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 GPRIN2O60269 458 aa15.26■□□□□ 0.03
PTPN7-209ENST00000477554 IGFBP1P08833 259 aaPredicted RBP15.26■□□□□ 0.03
PTPN7-209ENST00000477554 RPL4P36578 427 aaKnown RBP15.26■□□□□ 0.03
PTPN7-209ENST00000477554 RAB1AP62820 205 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms