RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, human

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5A-208	ENST00000476544	DAG1	Q14118	895 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	CLEC12B	Q2HXU8	276 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	TMEM255A	Q5JRV8	349 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	AQP12A	Q8IXF9	295 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	OR6V1	Q8N148	313 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	PAPD5	Q8NDF8	572 aa	Known RBP	11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	NPEPL1	Q8NDH3	523 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	OR8D4	Q8NGM9	314 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	AKR7L	Q8NHP1	331 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	ZNRF4	Q8WWF5	429 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	POM121L2	Q96KW2	1035 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	ERMAP	Q96PL5	475 aa	Predicted RBP	11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	ZNF416	Q9BWM5	594 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	PLA2G12A	Q9BZM1	189 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	NUAK2	Q9H093	628 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	SYT4	Q9H2B2	425 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	EGLN3	Q9H6Z9	239 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	RNF121	Q9H920	327 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	NTN4	Q9HB63	628 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	EMC7	Q9NPA0	242 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	IL20	Q9NYY1	176 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	MYEF2	Q9P2K5	600 aa	Known RBP	11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	SLC7A8	Q9UHI5	535 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	COA3	Q9Y2R0	106 aa	Predicted RBP	11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544		U3KQV3	271 aa		11.76	□□□□□ -0.53
RAB5A-208	ENST00000476544	OR6C68	A6NDL8	312 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544		B9A039	149 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	SSX4	O60224	188 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	SLC16A7	O60669	478 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	DNAJC8	O75937	253 aa	Predicted RBP	11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	RAB36	O95755	333 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	LY6G6D	O95868	133 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	F12	P00748	615 aa	Predicted RBP	11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	CST2	P09228	141 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	INHBB	P09529	407 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	RAP2A	P10114	183 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	HIST1H1C	P16403	213 aa	Known RBP	11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	GLRX	P35754	106 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	WNT5A	P41221	380 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	ERF	P50548	548 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	ERVS71-1	P61550	626 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	KRTAP1-1	Q07627	177 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	KRR1	Q13601	381 aa	Known RBP	11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	MICA	Q29983	383 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	SLC36A2	Q495M3	483 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	FAM98B	Q52LJ0	330 aa	Known RBP	11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	ZNF620	Q6ZNG0	422 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	DPPA2	Q7Z7J5	298 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	SVOPL	Q8N434	492 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	MAPK1IP1L	Q8NDC0	245 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	SLC30A7	Q8NEW0	376 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	OR4K13	Q8NH42	304 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	FNDC8	Q8TC99	324 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	ZNF570	Q96NI8	536 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	SORCS2	Q96PQ0	1159 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	NMNAT3	Q96T66	252 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	MRPL37	Q9BZE1	423 aa	Known RBP	11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	OR2H1	Q9GZK4	316 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	TMCC3	Q9ULS5	477 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	FZR1	Q9UM11	496 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	B9D1	Q9UPM9	204 aa		11.75	□□□□□ -0.53
RAB5A-208	ENST00000476544	IGHV4-30-2	A0A087WSY4	118 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	IGLV1-36	A0A0B4J1U3	117 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	BHLHE40	O14503	412 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	CCNB2	O95067	398 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	FARS2	O95363	451 aa	Known RBP	11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	UCP2	P55851	309 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	SNTB2	Q13425	540 aa	Known RBP	11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	RAB35	Q15286	201 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	KCNMB1	Q16558	191 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	DNAL1	Q4LDG9	190 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	SLC35F1	Q5T1Q4	408 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	ZNF774	Q6NX45	483 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	TMEM53	Q6P2H8	277 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	HS3ST5	Q8IZT8	346 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	AQP11	Q8NBQ7	271 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	C11orf40	Q8WZ69	217 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	MRPL24	Q96A35	216 aa	Known RBP	11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	NIPSNAP1	Q9BPW8	284 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	KCNS3	Q9BQ31	491 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	BDH2	Q9BUT1	245 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	REG4	Q9BYZ8	158 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	SRA1	Q9HD15	236 aa	Known RBP	11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	REV1	Q9UBZ9	1251 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	TIMM10B	Q9Y5J6	103 aa		11.74	□□□□□ -0.53
RAB5A-208	ENST00000476544	DHRS12	A0PJE2	317 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	RNF223	E7ERA6	249 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	SMAD7	O15105	426 aa	Known RBP	11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	KHDRBS3	O75525	346 aa	Known RBP	11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	SNAP29	O95721	258 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	CLPTM1	O96005	669 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	NGF	P01138	241 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	TF	P02787	698 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	FAM157B	P0CG42	384 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	MSR1	P21757	451 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	PRKACG	P22612	351 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	STOM	P27105	288 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	SLC6A6	P31641	620 aa		11.73	□□□□□ -0.53
RAB5A-208	ENST00000476544	IFNGR2	P38484	337 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms