RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 CXXC4Q9H2H0 198 aa11.96□□□□□ -0.49
SOD1-204ENST00000476106 LIME1Q9H400 295 aa11.96□□□□□ -0.49
SOD1-204ENST00000476106 SRA1Q9HD15 236 aaKnown RBP11.96□□□□□ -0.49
SOD1-204ENST00000476106 CCNB1IP1Q9NPC3 277 aa11.96□□□□□ -0.49
SOD1-204ENST00000476106 OBP2BQ9NPH6 170 aa11.96□□□□□ -0.49
SOD1-204ENST00000476106 COA3Q9Y2R0 106 aaPredicted RBP11.96□□□□□ -0.49
SOD1-204ENST00000476106 OR6C68A6NDL8 312 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 M0R129 80 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 DCTN6O00399 190 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 ARPC3O15145 178 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 KHDRBS3O75525 346 aaKnown RBP11.95□□□□□ -0.5
SOD1-204ENST00000476106 UBL3O95164 117 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 MPZL1O95297 269 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 HLA-DQA2P01906 255 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 GYPBP06028 91 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 ZNF3P17036 446 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 MSR1P21757 451 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 IGFBP5P24593 272 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 LAP3P28838 519 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 MRPS34P82930 218 aaKnown RBP11.95□□□□□ -0.5
SOD1-204ENST00000476106 HSF2Q03933 536 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 COX10Q12887 443 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 CRMP1Q14194 572 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 GINS1Q14691 196 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 RAB39AQ14964 217 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 MEP1BQ16820 701 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 SLC36A2Q495M3 483 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 SLC27A4Q6P1M0 643 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 TMEM53Q6P2H8 277 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 FAHD1Q6P587 224 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 DNM1P34Q6PK57 102 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 CD300LDQ6UXZ3 194 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 BIVMQ86UB2 503 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 C10orf67Q8IYJ2 551 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 LNX2Q8N448 690 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 SLC37A3Q8NCC5 494 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 PROKR2Q8NFJ6 384 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 OR51L1Q8NGJ5 315 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 AKAP1Q92667 903 aaKnown RBP eCLIP11.95□□□□□ -0.5
SOD1-204ENST00000476106 NABP1Q96AH0 204 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 GABARAPL1Q9H0R8 117 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 KCNN2Q9H2S1 579 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 RIBC2Q9H4K1 309 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 MED20Q9H944 212 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 VSX1Q9NZR4 365 aaPredicted RBP11.95□□□□□ -0.5
SOD1-204ENST00000476106 MOKQ9UQ07 419 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 PLEKHA6Q9Y2H5 1048 aa11.95□□□□□ -0.5
SOD1-204ENST00000476106 FAM183AA6NL82 134 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 KIAA1324LA8MWY0 1029 aaPredicted RBP11.94□□□□□ -0.5
SOD1-204ENST00000476106 EI24O14681 340 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 IDH3BO43837 385 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 GOSR1O95249 250 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 IFNGP01579 166 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 SCG5P05408 212 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 PTAFRP25105 342 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 GRK5P34947 590 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 ZNF133P52736 654 aaPredicted RBP11.94□□□□□ -0.5
SOD1-204ENST00000476106 RAB1AP62820 205 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 RCN1Q15293 331 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 UGT2A3Q6UWM9 527 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 ZNF627Q7L945 461 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 SSX8Q7RTT4 187 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 PQLC1Q8N2U9 271 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 NPEPL1Q8NDH3 523 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 AKR7LQ8NHP1 331 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 PLEKHA8Q96JA3 519 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 ZNF416Q9BWM5 594 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 OR51B6Q9H340 312 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 POLE4Q9NR33 117 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 DLL4Q9NR61 685 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 KLHL21Q9UJP4 597 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 BAIAP2Q9UQB8 552 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 ATP23Q9Y6H3 246 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 CHD3Q12873 2000 aaKnown RBP11.94□□□□□ -0.5
SOD1-204ENST00000476106 ARFGEF3Q5TH69 2177 aa11.94□□□□□ -0.5
SOD1-204ENST00000476106 ARID1AO14497 2285 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 IGLV1-36A0A0B4J1U3 117 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 SHISA9B4DS77 424 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 AHCYL1O43865 530 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 CLUP10909 449 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 CCL2P13500 99 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
SOD1-204ENST00000476106 CBR1P16152 277 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 ZNF32P17041 273 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 NPR2P20594 1047 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 CRABP1P29762 137 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 ARR3P36575 388 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 CRISP1P54107 249 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 NAAAQ02083 359 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 ACSM5Q6NUN0 579 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 VHLLQ6RSH7 139 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 LYPD4Q6UWN0 246 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 B3GLCTQ6Y288 498 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 PRIMA1Q86XR5 153 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 GLB1L2Q8IW92 636 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 CCDC36Q8IYA8 594 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 OR6V1Q8N148 313 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 OR6K6Q8NGW6 343 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 DNAJC9Q8WXX5 260 aa11.93□□□□□ -0.5
SOD1-204ENST00000476106 FBXO17Q96EF6 278 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms