RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 RPL7P18124 248 aaKnown RBP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 GABRA5P31644 462 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 RPL11P62913 178 aaKnown RBP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 TPBGQ13641 420 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 CRMP1Q14194 572 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 GPR18Q14330 331 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 CNKSR3Q6P9H4 555 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 MOB3CQ70IA8 216 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 SDR9C7Q8NEX9 313 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 SECTM1Q8WVN6 248 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 BOCQ9BWV1 1114 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 CHRNA9Q9UGM1 479 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ADAM12O43184 909 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 XRCC3O43542 346 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 HPNP05981 417 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 ACP2P11117 423 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 CSN1S1P47710 185 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 HHEXQ03014 270 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF770Q6IQ21 691 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 KDF1Q8NAX2 398 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 GAR1Q9NY12 217 aaKnown RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 CHST2Q9Y4C5 530 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 THBS1P07996 1170 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 ACAA1P09110 424 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 NTF3P20783 257 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 ACRV1P26436 265 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF140P52738 457 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 SOX4Q06945 474 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 EIF4EBP2Q13542 120 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 EBPQ15125 230 aaKnown RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 Q6ZRG5 221 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 C19orf35Q6ZS72 473 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 SYT13Q7L8C5 426 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 NR2C2APQ86WQ0 139 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 SLC35F3Q8IY50 421 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 OR10R2Q8NGX6 335 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 SCARB1Q8WTV0 552 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 SEC22AQ96IW7 307 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 CAPNS2Q96L46 248 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 C1QTNF2Q9BXJ5 285 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 DDX31Q9H8H2 851 aaKnown RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 SLC6A20Q9NP91 592 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 SPHK2Q9NRA0 654 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 OR52A1Q9UKL2 312 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 TRABD2BA6NFA1 517 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 MAN2B1O00754 1011 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 TCAPO15273 167 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 CIDEAO60543 219 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 EIF3GO75821 320 aaKnown RBP eCLIP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 F3P13726 295 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 IL3RAP26951 378 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 UBE2G1P62253 170 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 RGNQ15493 299 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 Q1RN00 199 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 OR7E24Q6IFN5 339 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF425Q6IV72 752 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 LCTLQ6UWM7 567 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 NAGSQ8N159 534 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 OR5M8Q8NGP6 311 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 ASB17Q8WXJ9 295 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 APIPQ96GX9 242 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF845Q96IR2 970 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 ABHD1Q96SE0 405 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 CXXC1Q9P0U4 656 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 USP36Q9P275 1121 aaKnown RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 GALR3O60755 368 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 CPN1P15169 458 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 SOX18P35713 384 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 HMGA2P52926 109 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 LCN6P62502 163 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 ENDOGQ14249 297 aaKnown RBP10.6□□□□□ -0.71
U2AF1-209ENST00000475639 TAF9Q16594 264 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 IL20RBQ6UXL0 311 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 FCRLAQ7L513 359 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 OR13C9Q8NGT0 318 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 KCNG3Q8TAE7 436 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 SMIM14Q96QK8 99 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 CTDSP1Q9GZU7 261 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 CYSLTR2Q9NS75 346 aa10.6□□□□□ -0.71
U2AF1-209ENST00000475639 A0A0D9SEW6 157 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF593O00488 134 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-209ENST00000475639 UGDHO60701 494 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 IGLV3-25P01717 112 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 IGHG1P01857 330 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 CD63P08962 238 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 MMP7P09237 267 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-209ENST00000475639 HOXA11P31270 313 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-209ENST00000475639 PCGF2P35227 344 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 HNRNPA3P51991 378 aaKnown RBP10.59□□□□□ -0.71
U2AF1-209ENST00000475639 RAC1P63000 192 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 DHODHQ02127 395 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 CLINT1Q14677 625 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 IAH1Q2TAA2 248 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-209ENST00000475639 C1orf87Q8N0U7 546 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 KLHDC1Q8N7A1 406 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 ARIH2OSQ8N7S6 290 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 CNEP1R1Q8N9A8 125 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 OR52N1Q8NH53 320 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 PBX4Q9BYU1 374 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms