RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 CLUP10909 449 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 IL32P24001 234 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 GSTT1P30711 240 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 PYCR1P32322 319 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 UGT2B10P36537 528 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 FOXG1P55316 489 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-224ENST00000475524 PCBD1P61457 104 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 TFF3Q07654 80 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 KLHL12Q53G59 568 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 TIMM23BQ5SRD1 257 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 KRT80Q6KB66 452 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 BBS1Q8NFJ9 593 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 OR6K6Q8NGW6 343 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 RERGLQ9H628 205 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 SEC61A2Q9H9S3 476 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 AMDHD2Q9Y303 409 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 KLF2Q9Y5W3 355 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-224ENST00000475524 COMMD3-BMI1R4GMX3 469 aa13.29□□□□□ -0.28
MCF2L-224ENST00000475524 UBR5O95071 2799 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-224ENST00000475524 OR5H1A6NKK0 313 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 FAM90A27PA6NNH2 459 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 C12orf71A8MTZ7 269 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 TMCC2O75069 709 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 LYZL6O75951 148 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 TFP02787 698 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 CCDC159P0C7I6 412 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 B4GALT1P15291 398 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 ZNF823P16415 610 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 HOXC12P31275 282 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 MTNR1AP48039 350 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 ENTPD1P49961 510 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 RPS7P62081 194 aaKnown RBP13.28□□□□□ -0.28
MCF2L-224ENST00000475524 MED21Q13503 144 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 AQP6Q13520 282 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 TBRG1Q3YBR2 411 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 SLC36A2Q495M3 483 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 KLHL24Q6TFL4 600 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 SHFQ7M4L6 423 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 TIGD4Q8IY51 512 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 FAM169BQ8N8A8 192 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 OR10H5Q8NGA6 315 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 SSC4DQ8WTU2 575 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 C11orf40Q8WZ69 217 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 INTS14Q96SY0 518 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 YIPF3Q9GZM5 350 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 KCNN2Q9H2S1 579 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 SLC17A5Q9NRA2 495 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 MRPL22Q9NWU5 206 aaKnown RBP13.28□□□□□ -0.28
MCF2L-224ENST00000475524 FBXL3Q9UKT7 428 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 PCDHGB1Q9Y5G3 927 aa13.28□□□□□ -0.28
MCF2L-224ENST00000475524 CACNA1CQ13936 2221 aa13.27□□□□□ -0.28
MCF2L-224ENST00000475524 RAD51DO75771 328 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 UBL3O95164 117 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 WNT11O96014 354 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 HLA-DQA2P01906 255 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 DBTP11182 482 aaKnown RBP13.27□□□□□ -0.29
MCF2L-224ENST00000475524 PIPP12273 146 aaPredicted RBP13.27□□□□□ -0.29
MCF2L-224ENST00000475524 CCKARP32238 428 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 CDAP32320 146 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 ZNF91Q05481 1191 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 FAM27E3Q08E93 113 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 RAB40BQ12829 278 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 ENDOGQ14249 297 aaKnown RBP13.27□□□□□ -0.29
MCF2L-224ENST00000475524 SGCAQ16586 387 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 C3orf36Q3SXR2 165 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 KLHL22Q53GT1 634 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 C6orf141Q5SZD1 244 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 RHOUQ7L0Q8 258 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 SLC16A9Q7RTY1 509 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 BCDIN3DQ7Z5W3 292 aaKnown RBP13.27□□□□□ -0.29
MCF2L-224ENST00000475524 ZNF454Q8N9F8 522 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 OR51L1Q8NGJ5 315 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 CNIH3Q8TBE1 160 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 ZNRF4Q8WWF5 429 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 HSD17B8Q92506 261 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 ZMYND19Q96E35 227 aaPredicted RBP13.27□□□□□ -0.29
MCF2L-224ENST00000475524 CNBD2Q96M20 576 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 CNN2Q99439 309 aaKnown RBP13.27□□□□□ -0.29
MCF2L-224ENST00000475524 YTHDF1Q9BYJ9 559 aaKnown RBP13.27□□□□□ -0.29
MCF2L-224ENST00000475524 CNOT2Q9NZN8 540 aaKnown RBP13.27□□□□□ -0.29
MCF2L-224ENST00000475524 ATPIF1Q9UII2 106 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 TMEM14AQ9Y6G1 99 aa13.27□□□□□ -0.29
MCF2L-224ENST00000475524 NKX2-6A6NCS4 301 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 SBK2P0C263 348 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 ARR3P36575 388 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 SLC15A1P46059 708 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 UBE2NP61088 152 aaKnown RBP13.26□□□□□ -0.29
MCF2L-224ENST00000475524 HIST1H3AP68431 136 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 ADAM8P78325 824 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 SCRN3Q0VDG4 424 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 CDSNQ15517 529 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 RBM48Q5RL73 367 aaKnown RBP13.26□□□□□ -0.29
MCF2L-224ENST00000475524 HIST2H3PS2Q5TEC6 136 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 C9orf135Q5VTT2 229 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 HIST2H3AQ71DI3 136 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 SLC16A14Q7RTX9 510 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 EGFL6Q8IUX8 553 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 SKA3Q8IX90 412 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 ZNF511Q8NB15 262 aa13.26□□□□□ -0.29
MCF2L-224ENST00000475524 MYCBPQ99417 103 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms