RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 DAOP14920 347 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 OMPP47874 163 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 HMGA2P52926 109 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 RPS23P62266 143 aaKnown RBP13.08□□□□□ -0.32
VARS-223ENST00000474643 ERVK-25P63136 954 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 NEU4Q8WWR8 484 aaPredicted RBP13.08□□□□□ -0.32
VARS-223ENST00000474643 FOXN4Q96NZ1 517 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 CHID1Q9BWS9 393 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 NOX3Q9HBY0 568 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 GRHPRQ9UBQ7 328 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 ZNF346Q9UL40 294 aaKnown RBP13.08□□□□□ -0.32
VARS-223ENST00000474643 AP4S1Q9Y587 144 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 ATRQ13535 2644 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 A0A096LNT2 108 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 A6NIZ1 184 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 XKRYO14609 159 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 ADRA2AP08913 450 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 TSPAN19P0C672 248 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 SRD5A1P18405 259 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 GIPRP48546 466 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 RAP1BP61224 184 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 RAP1AP62834 184 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 HGFACQ04756 655 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 RUNX1T1Q06455 604 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 ARMC4Q5T2S8 1044 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 FAM205BPQ63HN1 556 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 MYPOPQ86VE0 399 aaPredicted RBP13.07□□□□□ -0.32
VARS-223ENST00000474643 SPATA3Q8NHX4 192 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 FANK1Q8TC84 345 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 GNPDA2Q8TDQ7 276 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 RBP7Q96R05 134 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 BPESC1Q9GZL8 116 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 RNF121Q9H920 327 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 IL20RAQ9UHF4 553 aa13.07□□□□□ -0.32
VARS-223ENST00000474643 SAMHD1Q9Y3Z3 626 aaKnown RBP13.07□□□□□ -0.32
VARS-223ENST00000474643 A0A1W2PPW3 197 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 NPIPB13A6NJU9 1138 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 CENPBD1B2RD01 187 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 NPIPB4C9JG80 1138 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 M0R233 179 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 CCNB2O95067 398 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 CST1P01037 141 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 GUCA1AP43080 201 aaPredicted RBP13.06□□□□□ -0.32
VARS-223ENST00000474643 LIMS1P48059 325 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 ERFP50548 548 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 CHN2P52757 468 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 SELENOVP59797 346 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 RAB1AP62820 205 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 OR2T5Q6IEZ7 315 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 TMEM53Q6P2H8 277 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 SMARCD3Q6STE5 483 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 LINC00471Q8N535 108 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 OR2T29Q8NH02 315 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 NSMAFQ92636 917 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 HDAC2Q92769 488 aaKnown RBP13.06□□□□□ -0.32
VARS-223ENST00000474643 MCHR2Q969V1 340 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 SLCO4A1Q96BD0 722 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 ZNF570Q96NI8 536 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 TSPAN32Q96QS1 320 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 ALG12Q9BV10 488 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 TPK1Q9H3S4 243 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 TMEM160Q9NX00 188 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 SIGLEC7Q9Y286 467 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 LYVE1Q9Y5Y7 322 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 U3KQV3 271 aa13.06□□□□□ -0.32
VARS-223ENST00000474643 IGHV4-61A0A0C4DH41 118 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 ZNF503-AS2A6NEH8 195 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 SYNGR3O43761 229 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 DEAF1O75398 565 aaPredicted RBP13.05□□□□□ -0.32
VARS-223ENST00000474643 SLC2A10O95528 541 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 TGFAP01135 160 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 IGHMP01871 453 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 CD14P08571 375 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 OR8G3PP0DMU2 310 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 ZNF23P17027 643 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 NR4A1P22736 598 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 PPP1R8Q12972 351 aaKnown RBP13.05□□□□□ -0.32
VARS-223ENST00000474643 LRFN4Q6PJG9 635 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 ZER1Q7Z7L7 766 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 ZCCHC24Q8N2G6 241 aaKnown RBP13.05□□□□□ -0.32
VARS-223ENST00000474643 SLC22A24Q8N4F4 322 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 LRRC75AQ8NAA5 344 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 FNDC8Q8TC99 324 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 UBASH3BQ8TF42 649 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 STMN2Q93045 179 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 Q96M85 177 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 SYT3Q9BQG1 590 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 FUZQ9BT04 418 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 MRPL13Q9BYD1 178 aaKnown RBP13.05□□□□□ -0.32
VARS-223ENST00000474643 KCNN2Q9H2S1 579 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 DNAJB9Q9UBS3 223 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 ADAM18Q9Y3Q7 739 aa13.05□□□□□ -0.32
VARS-223ENST00000474643 COL6A5A8TX70 2615 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 ANK3Q12955 4377 aaKnown RBP13.04□□□□□ -0.32
VARS-223ENST00000474643 TEX13CA0A0J9YWL9 993 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 H7C1C5 153 aa13.04□□□□□ -0.32
VARS-223ENST00000474643 PHF1O43189 567 aaPredicted RBP13.04□□□□□ -0.32
VARS-223ENST00000474643 PTP4A3O75365 173 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms