RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 CAMK2AQ9UQM7 478 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 ZGRF1Q86YA3 2104 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 A0A087WV48 116 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 A0A1W2PPL8 197 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF254O75437 659 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 ATE1O95260 518 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 HLA-DPB1P04440 258 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 SPARCP09486 303 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 CELP19835 753 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 UGT2B10P36537 528 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 CD79BP40259 229 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 HCCSP53701 268 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 LSM6P62312 80 aaKnown RBP11.37□□□□□ -0.59
VPS13D-205ENST00000473099 NFATC3Q12968 1075 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 ETFDHQ16134 617 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF684Q5T5D7 378 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 CARD17Q5XLA6 110 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 RPL22L1Q6P5R6 122 aaKnown RBP11.37□□□□□ -0.59
VPS13D-205ENST00000473099 FOXL2NBQ6ZUU3 175 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 USP43Q70EL4 1123 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 RHOUQ7L0Q8 258 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 SSX6Q7RTT6 188 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 SIAH3Q8IW03 269 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 GPR137CQ8N3F9 429 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 MS4A15Q8N5U1 240 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 THEM6Q8WUY1 208 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 NSMAFQ92636 917 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 PELI1Q96FA3 418 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 ABHD17AQ96GS6 310 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 TSC22D3Q99576 134 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 CDADC1Q9BWV3 514 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 MROQ9BYG7 248 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 ULBP2Q9BZM5 246 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 LINC00470Q9BZP3 86 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 NELFAQ9H3P2 528 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 SIAEQ9HAT2 523 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 GSTK1Q9Y2Q3 226 aa11.37□□□□□ -0.59
VPS13D-205ENST00000473099 NOSIPQ9Y314 301 aaKnown RBP11.37□□□□□ -0.59
VPS13D-205ENST00000473099 INTS1Q8N201 2190 aaKnown RBP11.37□□□□□ -0.59
VPS13D-205ENST00000473099 ARPC4-TTLL3A0A0A6YYG9 625 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 IGKV1D-43A0A0B4J1Z2 117 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 LOC100506127A0A0U1RQW1 187 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 TRDV1A0A1B0GX56 115 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 OGG1O15527 345 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 DHHO43323 396 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 GPRIN2O60269 458 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 MRPL33O75394 65 aaKnown RBP11.36□□□□□ -0.59
VPS13D-205ENST00000473099 LALBAP00709 142 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 SERPINA3P01011 423 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 NPR2P20594 1047 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 FGF9P31371 208 aaPredicted RBP11.36□□□□□ -0.59
VPS13D-205ENST00000473099 CRYBB2P43320 205 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 SELENOPP49908 381 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 SIRPAP78324 504 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 ROM1Q03395 351 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 DBPQ10586 325 aaPredicted RBP11.36□□□□□ -0.59
VPS13D-205ENST00000473099 EIF2B1Q14232 305 aaKnown RBP11.36□□□□□ -0.59
VPS13D-205ENST00000473099 TP53I3Q53FA7 332 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 DMKNQ6E0U4 476 aaPredicted RBP11.36□□□□□ -0.59
VPS13D-205ENST00000473099 LRFN4Q6PJG9 635 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 CD200R1LQ6Q8B3 271 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 WDFY1Q8IWB7 410 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF679Q8IYX0 411 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 YIPF7Q8N8F6 280 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 OR2AJ1Q8NGZ0 328 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 OR52N5Q8NH56 324 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 CPT1CQ8TCG5 803 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 ABHD3Q8WU67 409 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 C11orf40Q8WZ69 217 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 OR8B4Q96RC9 309 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 CHCHD6Q9BRQ6 235 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 WACQ9BTA9 647 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 OR51E2Q9H255 320 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 KCNN2Q9H2S1 579 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 SEC61A2Q9H9S3 476 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 EXOSC4Q9NPD3 245 aaKnown RBP11.36□□□□□ -0.59
VPS13D-205ENST00000473099 POLE4Q9NR33 117 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 RALYQ9UKM9 306 aaKnown RBP11.36□□□□□ -0.59
VPS13D-205ENST00000473099 IKZF2Q9UKS7 526 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 TP53TG5Q9Y2B4 290 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 POLR1DQ9Y2S0 133 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 RAXQ9Y2V3 346 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 SF3B6Q9Y3B4 125 aaKnown RBP11.36□□□□□ -0.59
VPS13D-205ENST00000473099 ZFYVE26Q68DK2 2539 aa11.36□□□□□ -0.59
VPS13D-205ENST00000473099 LAMA5O15230 3695 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 A0A1W2PPW3 197 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 SLC22A20A6NK97 555 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 AHRRA9YTQ3 701 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 GPANK1O95872 356 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 PDGFAP04085 211 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 YES1P07947 543 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 MSR1P21757 451 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 SERPINB10P48595 397 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 RIDAP52758 137 aaKnown RBP11.35□□□□□ -0.59
VPS13D-205ENST00000473099 VBP1P61758 197 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 MRPS34P82930 218 aaKnown RBP11.35□□□□□ -0.59
VPS13D-205ENST00000473099 DOC2BQ14184 412 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 CDK5R1Q15078 307 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 NRN1LQ496H8 165 aa11.35□□□□□ -0.59
VPS13D-205ENST00000473099 KRTCAP3Q53RY4 240 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms