RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SAGP10523 405 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-203ENST00000472892 PCMT1P22061 227 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 CTXN1P60606 82 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 LMO4P61968 165 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 CCL8P80075 99 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 PSG4Q00888 419 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 LIPEQ05469 1076 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 TOP3AQ13472 1001 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-203ENST00000472892 TRAM2Q15035 370 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 FAM205BPQ63HN1 556 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 C8orf82Q6P1X6 216 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-203ENST00000472892 FOXL2NBQ6ZUU3 175 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 CBLL1Q75N03 491 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 NRMQ8IXM6 262 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 CLDN22Q8N7P3 220 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 OR1J1Q8NGS3 322 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 OR51A7Q8NH64 312 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 SNX33Q8WV41 574 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 HOPXQ9BPY8 73 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-203ENST00000472892 RHCGQ9UBD6 479 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 TRAV27A0A087WT01 109 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 FAM157AC9JC47 383 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 CXCR6O00574 342 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 PRSS23O95084 383 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 TFP02787 698 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 CST2P09228 141 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 COX4I1P13073 169 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 CCNOP22674 350 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 LAP3P28838 519 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 WNT5AP41221 380 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 CRYBB2P43320 205 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 SLC9A3P48764 834 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 ERVK-25P63136 954 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 SRSF2Q01130 221 aaKnown RBP13.04□□□□□ -0.32
VTI1A-203ENST00000472892 LIPNQ5VXI9 398 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 OAFQ86UD1 273 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 MEX3DQ86XN8 651 aaKnown RBP13.04□□□□□ -0.32
VTI1A-203ENST00000472892 C1orf174Q8IYL3 243 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 ZNF101Q8IZC7 436 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 AKR7LQ8NHP1 331 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 ACOT11Q8WXI4 607 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-203ENST00000472892 MARS2Q96GW9 593 aaKnown RBP13.04□□□□□ -0.32
VTI1A-203ENST00000472892 C19orf24Q9BVV8 132 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 OR2H1Q9GZK4 316 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 NARFLQ9H6Q4 476 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 TREM2Q9NZC2 230 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 EIF3KQ9UBQ5 218 aaKnown RBP13.04□□□□□ -0.32
VTI1A-203ENST00000472892 TIMM10BQ9Y5J6 103 aa13.04□□□□□ -0.32
VTI1A-203ENST00000472892 A0A087WUU8 490 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 C5orf49A4QMS7 147 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 A6NIZ1 184 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 EFCAB9A8MZ26 197 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 NME4O00746 187 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 ICMTO60725 284 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 CDC14BO60729 498 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 CCDC22O60826 627 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 MT-ND5P03915 603 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 GAAP10253 952 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 DRD4P21917 467 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 SRP14P37108 136 aaKnown RBP13.03□□□□□ -0.32
VTI1A-203ENST00000472892 GUCA1AP43080 201 aaPredicted RBP13.03□□□□□ -0.32
VTI1A-203ENST00000472892 GDI2P50395 445 aaKnown RBP13.03□□□□□ -0.32
VTI1A-203ENST00000472892 RAP1BP61224 184 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 RAP1AP62834 184 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 TEKQ02763 1124 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 ZNF718Q3SXZ3 478 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 IFI44LQ53G44 452 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 TBPL2Q6SJ96 375 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 UNQ6126/PRO20091Q6UXV3 157 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 HACD2Q6Y1H2 254 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 TMPRSS11FQ6ZWK6 438 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 MBOAT2Q6ZWT7 520 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 IGFN1Q86VF2 1251 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 GLCCI1Q86VQ1 547 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 ALDH16A1Q8IZ83 802 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 RFLNBQ8N5W9 214 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 FAM156AQ8NDB6 213 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 ICA1LQ8NDH6 482 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 GEMIN6Q8WXD5 167 aaKnown RBP13.03□□□□□ -0.32
VTI1A-203ENST00000472892 TMEM186Q96B77 213 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 WNT5BQ9H1J7 359 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 EFCAB1Q9HAE3 211 aa13.03□□□□□ -0.32
VTI1A-203ENST00000472892 IGHV1-69-2A0A0G2JMI3 117 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 GSTA4O15217 222 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 GPR37O15354 613 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 ZNF682O95780 498 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 MSMBP08118 114 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 GCH1P30793 250 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 MDH1P40925 334 aaKnown RBP13.02□□□□□ -0.33
VTI1A-203ENST00000472892 GSK3BP49841 420 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 MMP15P51511 669 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 SLC7A2P52569 658 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 PCBD1P61457 104 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 TMEM255AQ5JRV8 349 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 MBNL2Q5VZF2 373 aaKnown RBP13.02□□□□□ -0.33
VTI1A-203ENST00000472892 ZNF730Q6ZMV8 503 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 FKBP9P1Q75LS8 142 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 TSEN54Q7Z6J9 526 aaKnown RBP13.02□□□□□ -0.33
VTI1A-203ENST00000472892 SYT9Q86SS6 491 aa13.02□□□□□ -0.33
VTI1A-203ENST00000472892 OR13C2Q8NGS9 318 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms