RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 TMEM114B3SHH9 223 aa2.56□□□□□ -2
CD46-213ENST00000471987 TMEM238C9JI98 176 aa2.56□□□□□ -2
CD46-213ENST00000471987 RNASEK-C17orf49H0YIS7 233 aa2.56□□□□□ -2
CD46-213ENST00000471987 KLRC4-KLRK1H3BQV0 150 aa2.56□□□□□ -2
CD46-213ENST00000471987 SGK494L7N484 410 aa2.56□□□□□ -2
CD46-213ENST00000471987 EIF3HO15372 352 aaKnown RBP eCLIP2.56□□□□□ -2
CD46-213ENST00000471987 NME2P1O60361 137 aa2.56□□□□□ -2
CD46-213ENST00000471987 PFDN1O60925 122 aa2.56□□□□□ -2
CD46-213ENST00000471987 SUPT3HO75486 399 aa2.56□□□□□ -2
CD46-213ENST00000471987 OR2F2O95006 317 aa2.56□□□□□ -2
CD46-213ENST00000471987 ANP32DO95626 131 aa2.56□□□□□ -2
CD46-213ENST00000471987 APOC1P02654 83 aa2.56□□□□□ -2
CD46-213ENST00000471987 APRTP07741 180 aa2.56□□□□□ -2
CD46-213ENST00000471987 ERCC1P07992 297 aaPredicted RBP2.56□□□□□ -2
CD46-213ENST00000471987 SMIM10L1P0DMW3 83 aa2.56□□□□□ -2
CD46-213ENST00000471987 RRASP10301 218 aa2.56□□□□□ -2
CD46-213ENST00000471987 PSKH1P11801 424 aa2.56□□□□□ -2
CD46-213ENST00000471987 CD36P16671 472 aa2.56□□□□□ -2
CD46-213ENST00000471987 PAICSP22234 425 aaKnown RBP2.56□□□□□ -2
CD46-213ENST00000471987 DPP4P27487 766 aa2.56□□□□□ -2
CD46-213ENST00000471987 OR1E1P30953 314 aa2.56□□□□□ -2
CD46-213ENST00000471987 MAGEA6P43360 314 aa2.56□□□□□ -2
CD46-213ENST00000471987 RPS10P46783 165 aaKnown RBP2.56□□□□□ -2
CD46-213ENST00000471987 NUMBP49757 651 aa2.56□□□□□ -2
CD46-213ENST00000471987 ATP6V0D1P61421 351 aa2.56□□□□□ -2
CD46-213ENST00000471987 IL9RQ01113 521 aa2.56□□□□□ -2
CD46-213ENST00000471987 FGL1Q08830 312 aa2.56□□□□□ -2
CD46-213ENST00000471987 EGFEM1PQ0D2K5 195 aa2.56□□□□□ -2
CD46-213ENST00000471987 CARTPTQ16568 116 aa2.56□□□□□ -2
CD46-213ENST00000471987 CYP51A1Q16850 503 aa2.56□□□□□ -2
CD46-213ENST00000471987 WHAMMP3Q1A5X7 153 aa2.56□□□□□ -2
CD46-213ENST00000471987 ADPRMQ3LIE5 342 aa2.56□□□□□ -2
CD46-213ENST00000471987 AKIRIN2Q53H80 203 aa2.56□□□□□ -2
CD46-213ENST00000471987 C5orf47Q569G3 176 aa2.56□□□□□ -2
CD46-213ENST00000471987 PRAMEF7Q5VXH5 474 aa2.56□□□□□ -2
CD46-213ENST00000471987 ANKRD26P1Q6NSI1 321 aa2.56□□□□□ -2
CD46-213ENST00000471987 H3F3CQ6NXT2 135 aa2.56□□□□□ -2
CD46-213ENST00000471987 PGAP1Q75T13 922 aa2.56□□□□□ -2
CD46-213ENST00000471987 PARGQ86W56 976 aa2.56□□□□□ -2
CD46-213ENST00000471987 ZNF683Q8IZ20 524 aa2.56□□□□□ -2
CD46-213ENST00000471987 KIR2DL5AQ8N109 375 aa2.56□□□□□ -2
CD46-213ENST00000471987 PROKR2Q8NFJ6 384 aa2.56□□□□□ -2
CD46-213ENST00000471987 OR2D3Q8NGH3 330 aa2.56□□□□□ -2
CD46-213ENST00000471987 OR51L1Q8NGJ5 315 aa2.56□□□□□ -2
CD46-213ENST00000471987 OR5D13Q8NGL4 314 aa2.56□□□□□ -2
CD46-213ENST00000471987 OR4A15Q8NGL6 344 aa2.56□□□□□ -2
CD46-213ENST00000471987 OR4A16Q8NH70 328 aa2.56□□□□□ -2
CD46-213ENST00000471987 RHEBL1Q8TAI7 183 aa2.56□□□□□ -2
CD46-213ENST00000471987 BLOC1S5Q8TDH9 187 aa2.56□□□□□ -2
CD46-213ENST00000471987 OSTF1Q92882 214 aa2.56□□□□□ -2
CD46-213ENST00000471987 SLC38A4Q969I6 547 aa2.56□□□□□ -2
CD46-213ENST00000471987 CPNE4Q96A23 557 aaPredicted RBP2.56□□□□□ -2
CD46-213ENST00000471987 ASB9Q96DX5 294 aa2.56□□□□□ -2
CD46-213ENST00000471987 CERS2Q96G23 380 aa2.56□□□□□ -2
CD46-213ENST00000471987 SMIM10Q96HG1 83 aa2.56□□□□□ -2
CD46-213ENST00000471987 DNAJC1Q96KC8 554 aaKnown RBP2.56□□□□□ -2
CD46-213ENST00000471987 PRRT1Q99946 306 aa2.56□□□□□ -2
CD46-213ENST00000471987 ZNF251Q9BRH9 671 aa2.56□□□□□ -2
CD46-213ENST00000471987 CENPKQ9BS16 269 aa2.56□□□□□ -2
CD46-213ENST00000471987 ROGDIQ9GZN7 287 aa2.56□□□□□ -2
CD46-213ENST00000471987 SIRPDQ9H106 197 aa2.56□□□□□ -2
CD46-213ENST00000471987 POLR3FQ9H1D9 316 aaPredicted RBP2.56□□□□□ -2
CD46-213ENST00000471987 SLC38A1Q9H2H9 487 aa2.56□□□□□ -2
CD46-213ENST00000471987 ELOVL6Q9H5J4 265 aa2.56□□□□□ -2
CD46-213ENST00000471987 ANKRA2Q9H9E1 313 aa2.56□□□□□ -2
CD46-213ENST00000471987 CAB39LQ9H9S4 337 aa2.56□□□□□ -2
CD46-213ENST00000471987 LPAR2Q9HBW0 351 aa2.56□□□□□ -2
CD46-213ENST00000471987 LYRM4Q9HD34 91 aa2.56□□□□□ -2
CD46-213ENST00000471987 STARD5Q9NSY2 213 aa2.56□□□□□ -2
CD46-213ENST00000471987 PARVAQ9NVD7 372 aa2.56□□□□□ -2
CD46-213ENST00000471987 RDH8Q9NYR8 311 aa2.56□□□□□ -2
CD46-213ENST00000471987 USE1Q9NZ43 259 aa2.56□□□□□ -2
CD46-213ENST00000471987 MYEF2Q9P2K5 600 aaKnown RBP2.56□□□□□ -2
CD46-213ENST00000471987 BCAP29Q9UHQ4 241 aa2.56□□□□□ -2
CD46-213ENST00000471987 LCMT1Q9UIC8 334 aa2.56□□□□□ -2
CD46-213ENST00000471987 FLVCR2Q9UPI3 526 aa2.56□□□□□ -2
CD46-213ENST00000471987 OR10H1Q9Y4A9 318 aa2.56□□□□□ -2
CD46-213ENST00000471987 GMPPBQ9Y5P6 360 aa2.56□□□□□ -2
CD46-213ENST00000471987 NUP155O75694 1391 aa2.56□□□□□ -2
CD46-213ENST00000471987 KIAA0232Q92628 1395 aa2.56□□□□□ -2
CD46-213ENST00000471987 ANKRD30BQ9BXX2 1392 aa2.56□□□□□ -2
CD46-213ENST00000471987 RAB3GAP2Q9H2M9 1393 aa2.56□□□□□ -2
CD46-213ENST00000471987 PLEKHG1Q9ULL1 1385 aa2.56□□□□□ -2
CD46-213ENST00000471987 PTPRUQ92729 1446 aa2.56□□□□□ -2
CD46-213ENST00000471987 A0A0U1RRA0 63 aa2.55□□□□□ -2
CD46-213ENST00000471987 A0A1B0GW15 77 aa2.55□□□□□ -2
CD46-213ENST00000471987 SMCO3A2RU48 225 aa2.55□□□□□ -2
CD46-213ENST00000471987 FABP12A6NFH5 140 aa2.55□□□□□ -2
CD46-213ENST00000471987 ZNF98A6NK75 572 aa2.55□□□□□ -2
CD46-213ENST00000471987 NPIPA7E9PJI5 369 aa2.55□□□□□ -2
CD46-213ENST00000471987 E9PLD3 99 aa2.55□□□□□ -2
CD46-213ENST00000471987 F8VP50 259 aa2.55□□□□□ -2
CD46-213ENST00000471987 MKRN2OSH3BPM6 223 aa2.55□□□□□ -2
CD46-213ENST00000471987 GRIN2DO15399 1336 aa2.55□□□□□ -2
CD46-213ENST00000471987 BCAS1O75363 584 aaPredicted RBP2.55□□□□□ -2
CD46-213ENST00000471987 H6PDO95479 791 aa2.55□□□□□ -2
CD46-213ENST00000471987 SNAP29O95721 258 aa2.55□□□□□ -2
CD46-213ENST00000471987 OXSR1O95747 527 aaPredicted RBP2.55□□□□□ -2
CD46-213ENST00000471987 CST4P01036 141 aa2.55□□□□□ -2
CD46-213ENST00000471987 HBQ1P09105 142 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms