RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TMEM53Q6P2H8 277 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 FAHD2BQ6P2I3 314 aaPredicted RBP6.86□□□□□ -1.31
USP48-207ENST00000471752 Q6ZR03 302 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 FAM86B1Q8N7N1 296 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 OR1J1Q8NGS3 322 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 ZNF519Q8TB69 540 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 SLC25A40Q8TBP6 338 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 LIPHQ8WWY8 451 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 GEMIN6Q8WXD5 167 aaKnown RBP6.86□□□□□ -1.31
USP48-207ENST00000471752 HPS1Q92902 700 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 BPIFA2Q96DR5 249 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 FAHD2AQ96GK7 314 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 C1QTNF5Q9BXJ0 243 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 OR2H1Q9GZK4 316 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 TXNIPQ9H3M7 391 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 MS4A5Q9H3V2 200 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 METTL17Q9H7H0 456 aaPredicted RBP6.86□□□□□ -1.31
USP48-207ENST00000471752 CDH20Q9HBT6 801 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 MSL2Q9HCI7 577 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 KLHL21Q9UJP4 597 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 SPEF1Q9Y4P9 236 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 IGHV3-64DA0A0J9YX35 117 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 ELOVL7A1L3X0 281 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 FAM220BPB1ANY3 271 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 PTP4A3O75365 173 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 ZNF682O95780 498 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 IGHV3-13P01766 116 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 VIMP08670 466 aaKnown RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 COX4I1P13073 169 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 ACHEP22303 614 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 THBS2P35442 1172 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 MSX2P35548 267 aaPredicted RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 RBM34P42696 430 aaKnown RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 CRYBB2P43320 205 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 GPR4P46093 362 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 GSK3BP49841 420 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 SLC7A2P52569 658 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 DVL1P1P54792 670 aaPredicted RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 TMEM33P57088 247 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 KLF3P57682 345 aaPredicted RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 RPL27P61353 136 aaKnown RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 SELENOWP63302 87 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 MRPS34P82930 218 aaKnown RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 PRKCDQ05655 676 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 CD47Q08722 323 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 SEC23BQ15437 767 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 SLC36A2Q495M3 483 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 MMEL1Q495T6 779 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 ALG10Q5BKT4 473 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 INTS11Q5TA45 600 aaKnown RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 FAM27BQ5VT28 67 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 C8orf82Q6P1X6 216 aaPredicted RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 USP51Q70EK9 711 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 SLC30A8Q8IWU4 369 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 OR2T12Q8NG77 320 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 KLF14Q8TD94 323 aaPredicted RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 C22orf15Q8WYQ4 148 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 C11orf40Q8WZ69 217 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 TMEM186Q96B77 213 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 RASD2Q96D21 266 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 Q96M85 177 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 LRRC37BQ96QE4 947 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 TMPRSS13Q9BYE2 586 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 DENND2DQ9H6A0 471 aaPredicted RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 ZNF665Q9H7R5 613 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 EVA1AQ9H8M9 152 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 MOV10Q9HCE1 1003 aaKnown RBP6.85□□□□□ -1.31
USP48-207ENST00000471752 G6PC2Q9NQR9 355 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 SLC7A8Q9UHI5 535 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 OPN4Q9UHM6 478 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 BAG5Q9UL15 447 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 HIF3AQ9Y2N7 669 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 STARD10Q9Y365 291 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 MED31Q9Y3C7 131 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 WIPI2Q9Y4P8 454 aa6.85□□□□□ -1.31
USP48-207ENST00000471752 A0A1W2PPL8 197 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 B4DSR2 109 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 DCTN6O00399 190 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 CXCR6O00574 342 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 UBOX5O94941 541 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 ZNF205O95201 554 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 FARS2O95363 451 aaKnown RBP6.84□□□□□ -1.31
USP48-207ENST00000471752 SNAP29O95721 258 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 MSMBP08118 114 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 DBHP09172 617 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 CTLA4P16410 223 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 SELEP16581 610 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 APLNRP35414 380 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 SLC9A3P48764 834 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 ZNF84P51523 738 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 SEC61A1P61619 476 aaKnown RBP6.84□□□□□ -1.31
USP48-207ENST00000471752 HSF2Q03933 536 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 PSG7Q13046 419 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 HLXQ14774 488 aaPredicted RBP6.84□□□□□ -1.31
USP48-207ENST00000471752 MEP1BQ16820 701 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 TBC1D28Q2M2D7 210 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 RSPO1Q2MKA7 263 aaPredicted RBP6.84□□□□□ -1.31
USP48-207ENST00000471752 MESTQ5EB52 335 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 COQ5Q5HYK3 327 aa6.84□□□□□ -1.31
USP48-207ENST00000471752 TMEM154Q6P9G4 183 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms