RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ATP6V1E1P36543 226 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 MRPS34P82930 218 aaKnown RBP16.85■□□□□ 0.29
PSPC1-203ENST00000471658 TMED1Q13445 227 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 GGTLC2Q14390 218 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 BEND4Q6ZU67 534 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 ABHD12BQ7Z5M8 362 aaPredicted RBP16.85■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF433Q8N7K0 673 aaPredicted RBP16.85■□□□□ 0.29
PSPC1-203ENST00000471658 OR6N2Q8NGY6 317 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 INTS14Q96SY0 518 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 TBX5Q99593 518 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 SCN3BQ9NY72 215 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 JKAMPQ9P055 326 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 ERVK-18Q9QC07 812 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 ERRFI1Q9UJM3 462 aaPredicted RBP16.85■□□□□ 0.29
PSPC1-203ENST00000471658 EXOGQ9Y2C4 368 aaKnown RBP16.85■□□□□ 0.29
PSPC1-203ENST00000471658 PCNX1Q96RV3 2341 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF462Q96JM2 2506 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 CNOT4O95628 575 aaKnown RBP16.84■□□□□ 0.29
PSPC1-203ENST00000471658 PATE4P0C8F1 98 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 CDH15P55291 814 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 ADAM8P78325 824 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 KCNMB1Q16558 191 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 CORO6Q6QEF8 472 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 LINC00346Q8IVM7 164 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 SLC22A24Q8N4F4 322 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 RFLNBQ8N5W9 214 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 OR1K1Q8NGR3 316 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 FGFBP3Q8TAT2 258 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 CNN2Q99439 309 aaKnown RBP16.84■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF416Q9BWM5 594 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 NELFAQ9H3P2 528 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 FKBP14Q9NWM8 211 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 COPS3Q9UNS2 423 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 TPRKBQ9Y3C4 175 aa16.84■□□□□ 0.29
PSPC1-203ENST00000471658 J3QRE1 110 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 ZNF823P16415 610 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 MSR1P21757 451 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 GUCA1AP43080 201 aaPredicted RBP16.83■□□□□ 0.28
PSPC1-203ENST00000471658 BLVRAP53004 296 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 CSNK2BP67870 215 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 SLC35A2P78381 396 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 FAM27E3Q08E93 113 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 ST3GAL4Q11206 333 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 ENDOGQ14249 297 aaKnown RBP16.83■□□□□ 0.28
PSPC1-203ENST00000471658 STK11Q15831 433 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 HIKESHIQ53FT3 197 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 SLC16A9Q7RTY1 509 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 DPY19L4Q7Z388 723 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 MRGPRGQ86SM5 289 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 SKA3Q8IX90 412 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 BCL2L2Q92843 193 aaPredicted RBP16.83■□□□□ 0.28
PSPC1-203ENST00000471658 COPS4Q9BT78 406 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 YTHDF1Q9BYJ9 559 aaKnown RBP16.83■□□□□ 0.28
PSPC1-203ENST00000471658 DUSP21Q9H596 190 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 SIAEQ9HAT2 523 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 TAS2R16Q9NYV7 291 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 COQ3Q9NZJ6 369 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 KLHDC2Q9Y2U9 406 aa16.83■□□□□ 0.28
PSPC1-203ENST00000471658 FAM208BQ5VWN6 2430 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 CIB4A0PJX0 185 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 EFCAB10A6NFE3 127 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 RAD51DO75771 328 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 HRGP04196 525 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 SPARCP09486 303 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 COX5AP20674 150 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 C21orf33P30042 268 aaPredicted RBP16.82■□□□□ 0.28
PSPC1-203ENST00000471658 CHRNB4P30926 498 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 ENTPD1P49961 510 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 RAB40BQ12829 278 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 KLHL22Q53GT1 634 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 SLC35F2Q8IXU6 374 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 OR10H5Q8NGA6 315 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 FBXO17Q96EF6 278 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 TTTY10Q9BZA0 68 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 FGF20Q9NP95 211 aaPredicted RBP16.82■□□□□ 0.28
PSPC1-203ENST00000471658 CNOT2Q9NZN8 540 aaKnown RBP16.82■□□□□ 0.28
PSPC1-203ENST00000471658 KCNG2Q9UJ96 466 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 LHFPL6Q9Y693 200 aa16.82■□□□□ 0.28
PSPC1-203ENST00000471658 FAM90A27PA6NNH2 459 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 ZG16O60844 167 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 RPSAP08865 295 aaKnown RBP16.81■□□□□ 0.28
PSPC1-203ENST00000471658 HTR1AP08908 422 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 PIPP12273 146 aaPredicted RBP16.81■□□□□ 0.28
PSPC1-203ENST00000471658 NPR2P20594 1047 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 EEF1B2P24534 225 aaKnown RBP16.81■□□□□ 0.28
PSPC1-203ENST00000471658 TUBA1BP68363 451 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 TUBA4AP68366 448 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 GABRA6Q16445 453 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 SFRP5Q5T4F7 317 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 FAM27BQ5VT28 67 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 STAC2Q6ZMT1 411 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 TUBA1AQ71U36 451 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 ZNF627Q7L945 461 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 CDC20BQ86Y33 519 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 STX19Q8N4C7 294 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 OR10H4Q8NGA5 316 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 NR1H4Q96RI1 486 aaPredicted RBP16.81■□□□□ 0.28
PSPC1-203ENST00000471658 AMELYQ99218 206 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 CDADC1Q9BWV3 514 aa16.81■□□□□ 0.28
PSPC1-203ENST00000471658 ZNF224Q9NZL3 707 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms