RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 KAT8Q9H7Z6 458 aaKnown RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 C12orf10Q9HB07 376 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 SCPEP1Q9HB40 452 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 B3GAT2Q9NPZ5 323 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 CTPS2Q9NRF8 586 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 SAMD4AQ9UPU9 718 aaKnown RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 TRAPPC4Q9Y296 219 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 LSM4Q9Y4Z0 139 aaKnown RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 GMEB1Q9Y692 573 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 NUP214P35658 2090 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 NBASA2RRP1 2371 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 MYO18BQ8IUG5 2567 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 GTF3C1Q12789 2109 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 DSPPQ9NZW4 1301 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 EML6Q6ZMW3 1958 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 A0A1W2PNV4 684 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 NKX2-6A6NCS4 301 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 H3BNX3 289 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 M0QX08 132 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 SPRY3O43610 288 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 FMO6PO60774 539 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 MRPL33O75394 65 aaKnown RBP5.49□□□□□ -1.53
PTCD3-208ENST00000469585 OPN1LWP04000 364 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 IFNW1P05000 195 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 YES1P07947 543 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 HOXB5P09067 269 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 NR2C1P13056 603 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 HOXB6P17509 224 aaKnown RBP5.49□□□□□ -1.53
PTCD3-208ENST00000469585 CALB2P22676 271 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 CEACAM8P31997 349 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-208ENST00000469585 GUCA1AP43080 201 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-208ENST00000469585 SLC7A2P52569 658 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 CLDN20P56880 219 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 SMIM11AP58511 58 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 PSME3P61289 254 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 SORDQ00796 357 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 LIPEQ05469 1076 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 OR7A5Q15622 319 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 MAPK14Q16539 360 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF239Q16600 458 aaKnown RBP5.49□□□□□ -1.53
PTCD3-208ENST00000469585 EXOC3L2Q2M3D2 409 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 DCST1Q5T197 706 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF613Q6PF04 617 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 TMPPEQ6ZT21 453 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 PXKQ7Z7A4 578 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 HMGN2P46Q86SG4 172 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 PARP16Q8N5Y8 322 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 SMYD1Q8NB12 490 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 FAM71CQ8NEG0 241 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 VANGL1Q8TAA9 524 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-208ENST00000469585 SCARB1Q8WTV0 552 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 GEMIN6Q8WXD5 167 aaKnown RBP5.49□□□□□ -1.53
PTCD3-208ENST00000469585 APH1AQ96BI3 265 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 SLC25A36Q96CQ1 311 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 MUCL1Q96DR8 90 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 MCHR1Q99705 422 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 KCNS3Q9BQ31 491 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 FNDC11Q9BVV2 318 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 CCDC106Q9BWC9 280 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 POTEKPQ9BYX7 375 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 MUC13Q9H3R2 512 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF385DQ9H6B1 395 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 RNF122Q9H9V4 155 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 SLC6A13Q9NSD5 602 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 SLC25A37Q9NYZ2 338 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 CLCF1Q9UBD9 225 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 KCNN3Q9UGI6 736 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 RASD1Q9Y272 281 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 NOSIPQ9Y314 301 aaKnown RBP5.49□□□□□ -1.53
PTCD3-208ENST00000469585 SH3GLB1Q9Y371 365 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 FAM215AQ9Y5M1 114 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 DNAJC13O75165 2243 aa5.49□□□□□ -1.53
PTCD3-208ENST00000469585 MYO7BQ6PIF6 2116 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 DIDO1Q9BTC0 2240 aaKnown RBP5.48□□□□□ -1.53
PTCD3-208ENST00000469585 FASNP49327 2511 aaKnown RBP5.48□□□□□ -1.53
PTCD3-208ENST00000469585 TRAV36DV7A0A075B6V5 113 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 A0A0J9YW62 118 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CIB4A0PJX0 185 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CLEC18AA5D8T8 446 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 TRAPPC13A5PLN9 417 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 HTR3EA5X5Y0 456 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CCT8L1PA6NM43 557 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CPSF4LA6NMK7 179 aaKnown RBP5.48□□□□□ -1.53
PTCD3-208ENST00000469585 INAFM1C9JVW0 142 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 USP17L23D6RBM5 183 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 C16orf97H3BN30 126 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CXCR6O00574 342 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 FBP2O00757 339 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 ZNHIT1O43257 154 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CHP2O43745 196 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 PAGE4O60829 102 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 ATP5HO75947 161 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 RGS11O94810 467 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 MT-ATP6P00846 226 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 OPN1SWP03999 348 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 SPARCP09486 303 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF43P17038 809 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 PAX7P23759 505 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CDAP32320 146 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 IFNGR2P38484 337 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms