RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 MS4A15Q8N5U1 240 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 Q8N7P7 452 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 SPATA4Q8NEY3 305 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 B3GNT7Q8NFL0 401 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 OR4F15Q8NGB8 312 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 RNF138Q8WVD3 245 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 STMN2Q93045 179 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 MED8Q96G25 268 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 RARRES2Q99969 163 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 UGT1A7Q9HAW7 530 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 UGT1A10Q9HAW8 530 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 UGT1A8Q9HAW9 530 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 NEU3Q9UQ49 428 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 TRAPPC4Q9Y296 219 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 PRG3Q9Y2Y8 225 aaPredicted RBP3.38□□□□□ -1.87
LSM5-209ENST00000468872 NSD2O96028 1365 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 KIAA0100Q14667 2235 aaKnown RBP3.38□□□□□ -1.87
LSM5-209ENST00000468872 KIF27Q86VH2 1401 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 QSER1Q2KHR3 1735 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 OR2AG2A6NM03 316 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 GKN3PP0CG01 181 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 TROVE2P10155 538 aaKnown RBP eCLIP3.37□□□□□ -1.87
LSM5-209ENST00000468872 RORAP35398 523 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 SUB1P53999 127 aaKnown RBP eCLIP3.37□□□□□ -1.872e-7■■■■□ 19.7
LSM5-209ENST00000468872 GPX6P59796 221 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 CCNA1P78396 465 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 MRPS22P82650 360 aaKnown RBP3.37□□□□□ -1.87
LSM5-209ENST00000468872 TGM3Q08188 693 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 PSG5Q15238 335 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 VPS26BQ4G0F5 336 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 METAP1DQ6UB28 335 aaPredicted RBP3.37□□□□□ -1.87
LSM5-209ENST00000468872 SASS6Q6UVJ0 657 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 ZNF836Q6ZNA1 936 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 OR10G9Q8NGN4 311 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 OR1S2Q8NGQ3 325 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 OR1N2Q8NGR9 330 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 SGK3Q96BR1 496 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 LRRC58Q96CX6 371 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 CYYR1Q96J86 154 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 CDX2Q99626 313 aaPredicted RBP3.37□□□□□ -1.87
LSM5-209ENST00000468872 KCTD14Q9BQ13 255 aaPredicted RBP3.37□□□□□ -1.87
LSM5-209ENST00000468872 CENPKQ9BS16 269 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 ILKAPQ9H0C8 392 aaPredicted RBP3.37□□□□□ -1.87
LSM5-209ENST00000468872 CLMPQ9H6B4 373 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 ANKRA2Q9H9E1 313 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 NUP50Q9UKX7 468 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 PACSIN2Q9UNF0 486 aaPredicted RBP3.37□□□□□ -1.87
LSM5-209ENST00000468872 PIK3R4Q99570 1358 aa3.37□□□□□ -1.87
LSM5-209ENST00000468872 CCDC144AA2RUR9 1427 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 LAMB2P55268 1798 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 COL14A1Q05707 1796 aaKnown RBP3.36□□□□□ -1.87
LSM5-209ENST00000468872 ZNF726A6NNF4 738 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 SLC31A2O15432 143 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 WBP4O75554 376 aaKnown RBP3.36□□□□□ -1.87
LSM5-209ENST00000468872 KRT6AP02538 564 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 FGGP02679 453 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 CSF3P09919 207 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 DRD3P35462 400 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 ACLYP53396 1101 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 CDH6P55285 790 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 ARHGAP19Q14CB8 494 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 VAX1Q5SQQ9 334 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 LRRC66Q68CR7 880 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 FRMPD2BQ6IN97 320 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 ZNF621Q6ZSS3 439 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 TTC5Q8N0Z6 440 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 SLC34A3Q8N130 599 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 BBS5Q8N3I7 341 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 GTPBP8Q8N3Z3 284 aaPredicted RBP3.36□□□□□ -1.87
LSM5-209ENST00000468872 CEP112Q8N8E3 955 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 OR2G3Q8NGZ4 309 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 GPR151Q8TDV0 419 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 ELMO1Q92556 727 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 CWH43Q9H720 699 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 SLC25A37Q9NYZ2 338 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 CACNG2Q9Y698 323 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 XIRP2A4UGR9 3374 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 BRD4O60885 1362 aaPredicted RBP3.36□□□□□ -1.87
LSM5-209ENST00000468872 KIAA1551Q9HCM1 1747 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 KDM6AO15550 1401 aaPredicted RBP3.36□□□□□ -1.87
LSM5-209ENST00000468872 ZFYVE9O95405 1425 aa3.36□□□□□ -1.87
LSM5-209ENST00000468872 PLEKHH2Q8IVE3 1493 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 DNAH14Q0VDD8 3507 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 A0A1B0GUA9 196 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 A0A1B0GVI7 797 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 PINLYPA6NC86 204 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 TRIM49D1C9J1S8 452 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 SGK1O00141 431 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 PPP1R2P9O14990 202 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 TSPAN13O95857 204 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 SFTPCP11686 197 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 HPGDP15428 266 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 NSG1P42857 185 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 ZNF92Q03936 586 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 SGCAQ16586 387 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 CST9Q5W186 159 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 SLC8B1Q6J4K2 584 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 HSD17B11Q8NBQ5 300 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 SDR42E1Q8WUS8 393 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 KIFAP3Q92845 792 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms