RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 SELPLGQ14242 412 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 SNRNP35Q16560 246 aaKnown RBP0.73□□□□□ -2.29
SSB-208ENST00000468600 RNASE13Q5GAN3 156 aaKnown RBP0.73□□□□□ -2.29
SSB-208ENST00000468600 THEM4Q5T1C6 240 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 MORN3Q6PF18 240 aaPredicted RBP0.73□□□□□ -2.29
SSB-208ENST00000468600 PLET1Q6UQ28 207 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 TMEM256Q8N2U0 113 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 C18orf15Q96N68 181 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 OR8B4Q96RC9 309 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 TIMM17AQ99595 171 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 TCHPQ9BT92 498 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 ZSCAN16Q9H4T2 348 aaPredicted RBP0.73□□□□□ -2.29
SSB-208ENST00000468600 PARP11Q9NR21 331 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 C8orf17Q9NRJ1 99 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 UFSP2Q9NUQ7 469 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 BFARQ9NZS9 450 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 U3KQV3 271 aa0.73□□□□□ -2.29
SSB-208ENST00000468600 FLG2Q5D862 2391 aaPredicted RBP0.72□□□□□ -2.29
SSB-208ENST00000468600 TRIP11Q15643 1979 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 TICRRQ7Z2Z1 1910 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 VWDEQ8N2E2 1590 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 C3orf84H3BNL1 204 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 H6PDO95479 791 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 HSMCR30P0CW71 290 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 INAFM2P0DMQ5 153 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 TCP1P17987 556 aaKnown RBP0.72□□□□□ -2.29
SSB-208ENST00000468600 CCR1P32246 355 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 IDH2P48735 452 aaKnown RBP0.72□□□□□ -2.29
SSB-208ENST00000468600 GMFBP60983 142 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 CRADDP78560 199 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 MAD2L1BPQ15013 274 aaPredicted RBP0.72□□□□□ -2.29
SSB-208ENST00000468600 KLHL38Q2WGJ6 581 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 SLC10A5Q5PT55 438 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 AVPI1Q5T686 147 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 C1QTNF12Q5T7M4 302 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 ZFAND6Q6FIF0 208 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 ZNF101Q8IZC7 436 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 PTX4Q96A99 478 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 MRGPRFQ96AM1 343 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 WDR34Q96EX3 536 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 ZNF607Q96SK3 696 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 NPY6RQ99463 290 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 MFFQ9GZY8 342 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 TAS2R1Q9NYW7 299 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 PIPOXQ9P0Z9 390 aa0.72□□□□□ -2.29
SSB-208ENST00000468600 ZBED9Q6R2W3 1325 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 CHST10O43529 356 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 SEC22BO75396 215 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 CYB5R3P00387 301 aaPredicted RBP0.71□□□□□ -2.3
SSB-208ENST00000468600 PFN1P07737 140 aaKnown RBP0.71□□□□□ -2.3
SSB-208ENST00000468600 RAB3BP20337 219 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 MAS1LP35410 378 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 PPT1P50897 306 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 DUSP3P51452 185 aaPredicted RBP0.71□□□□□ -2.3
SSB-208ENST00000468600 PGGHGQ32M88 737 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 SFT2D3Q587I9 215 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 C10orf120Q5SQS8 335 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 SPECC1LQ69YQ0 1117 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 STUMQ69YW2 141 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 OR10J6PQ8NGY7 276 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 MAGEE2Q8TD90 523 aaPredicted RBP0.71□□□□□ -2.3
SSB-208ENST00000468600 TMOD2Q9NZR1 351 aa0.71□□□□□ -2.3
SSB-208ENST00000468600 ADGRA3Q8IWK6 1321 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 IGHV7-4-1A0A0J9YVY3 117 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 REM1O75628 298 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 BAG2O95816 211 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 IGLV3-25P01717 112 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 CA8P35219 290 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 HSD17B2P37059 387 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 CDKN1BP46527 198 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 TAS2R31P59538 309 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 METTL21CQ5VZV1 264 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 SNX20Q7Z614 316 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 TTLQ8NG68 377 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 TRMT10AQ8TBZ6 339 aaKnown RBP0.7□□□□□ -2.3
SSB-208ENST00000468600 NTAN1Q96AB6 310 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 TMEM237Q96Q45 408 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 SH3GL1Q99961 368 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 ZNF649Q9BS31 505 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 C1orf50Q9BV19 199 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 FGF23Q9GZV9 251 aaPredicted RBP0.7□□□□□ -2.3
SSB-208ENST00000468600 NIPAL2Q9H841 368 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 SLC38A10Q9HBR0 1119 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 EPS15L1Q9UBC2 864 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 TMED5Q9Y3A6 229 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 CACNA1DQ01668 2161 aa0.7□□□□□ -2.3
SSB-208ENST00000468600 E7EQL1 145 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 MANBAO00462 879 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 CCL21O00585 134 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 FCMRO60667 390 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 NDUFB10O96000 172 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 MT-ND3P03897 115 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 IGKV1-16P04430 117 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 CALM1P0DP23 149 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 CALM2P0DP24 149 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 CALM3P0DP25 149 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 MPV17P39210 176 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 NUTF2P61970 127 aaKnown RBP0.69□□□□□ -2.3
SSB-208ENST00000468600 CDK16Q00536 496 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 MPV17L2Q567V2 206 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms