RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PSG4Q00888 419 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 ENDOGQ14249 297 aaKnown RBP13.05□□□□□ -0.32
ATG4B-215ENST00000468018 RFX4Q33E94 735 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 PGBD2Q6P3X8 592 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 PGM2L1Q6PCE3 622 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 SMARCD3Q6STE5 483 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 CLEC9AQ6UXN8 241 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 PTCHD4Q6ZW05 846 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 ZNF525Q8N782 197 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 POP5Q969H6 163 aaKnown RBP13.05□□□□□ -0.32
ATG4B-215ENST00000468018 SLC7A6OSQ96CW6 309 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-215ENST00000468018 CLPTM1LQ96KA5 538 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 BTBD10Q9BSF8 475 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 WACQ9BTA9 647 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 MRPL37Q9BZE1 423 aaKnown RBP13.05□□□□□ -0.32
ATG4B-215ENST00000468018 OR52D1Q9H346 318 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 CMAHPQ9Y471 501 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 SPEF1Q9Y4P9 236 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 HIVEP2P31629 2446 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 VSTM5A8MXK1 200 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 XKRYO14609 159 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 IMPA2O14732 288 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 SMAD7O15105 426 aaKnown RBP13.04□□□□□ -0.32
ATG4B-215ENST00000468018 OR10H3O60404 316 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 ICMTO60725 284 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 MSR1P21757 451 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 RPS6KA3P51812 740 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 RPS23P62266 143 aaKnown RBP13.04□□□□□ -0.32
ATG4B-215ENST00000468018 TRAP1Q12931 704 aaKnown RBP13.04□□□□□ -0.32
ATG4B-215ENST00000468018 TSPAN31Q12999 210 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 TBC1D28Q2M2D7 210 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 PABPC1L2AQ5JQF8 200 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 ZNF620Q6ZNG0 422 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 SYT9Q86SS6 491 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 ADCK1Q86TW2 530 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 SVOPLQ8N434 492 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 C10orf105Q8TEF2 133 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 POM121L2Q96KW2 1035 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 SNX18Q96RF0 628 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 ZNF416Q9BWM5 594 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 OR2H1Q9GZK4 316 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 SYT4Q9H2B2 425 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 RNF121Q9H920 327 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 IL20RAQ9UHF4 553 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 IER3IP1Q9Y5U9 82 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 MALRD1Q5VYJ5 2156 aa13.04□□□□□ -0.32
ATG4B-215ENST00000468018 NAV3Q8IVL0 2385 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 IGLV3-9A0A075B6K5 115 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 IQCMA0A1B0GVH7 501 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 VWC2LB2RUY7 222 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 LY6HO94772 140 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 CCL2P13500 99 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 APEX1P27695 318 aaKnown RBP13.03□□□□□ -0.32
ATG4B-215ENST00000468018 IFNGR2P38484 337 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 CDKN2AP42771 156 aaKnown RBP13.03□□□□□ -0.32
ATG4B-215ENST00000468018 GALK2Q01415 458 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 SGCAQ16586 387 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 CLEC2AQ6UVW9 174 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 LINC00471Q8N535 108 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 OR1J2Q8NGS2 313 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 FANK1Q8TC84 345 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 RHNO1Q9BSD3 238 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 WNT5BQ9H1J7 359 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 KCNN2Q9H2S1 579 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 MYOZ1Q9NP98 299 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-215ENST00000468018 CCNB1IP1Q9NPC3 277 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 VNN3Q9NY84 501 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 TMCC3Q9ULS5 477 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 FKBP7Q9Y680 259 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.03□□□□□ -0.328e-8■■■■■ 33.7
ATG4B-215ENST00000468018 NF1P21359 2839 aa13.03□□□□□ -0.32
ATG4B-215ENST00000468018 ABCA2Q9BZC7 2435 aa13.02□□□□□ -0.32
ATG4B-215ENST00000468018 LOC100509620A0A075B734 347 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 AQP12BA6NM10 295 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 TNFRSF11BO00300 401 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 ZNF250P15622 560 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 SLC25A16P16260 332 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 STOMP27105 288 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 SLC6A6P31641 620 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 WNT5AP41221 380 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 PLP2Q04941 152 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 LOXL1Q08397 574 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-215ENST00000468018 KCNMB1Q16558 191 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 UGT2A3Q6UWM9 527 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 LRP11Q86VZ4 500 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 AQP12AQ8IXF9 295 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 ADGRG5Q8IZF4 528 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 MAPK1IP1LQ8NDC0 245 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 OR9Q2Q8NGE9 314 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 GNPDA2Q8TDQ7 276 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 NEU4Q8WWR8 484 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-215ENST00000468018 FAM168AQ92567 244 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 CCDC124Q96CT7 223 aaKnown RBP13.02□□□□□ -0.33
ATG4B-215ENST00000468018 POM121Q96HA1 1249 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 THTPAQ9BU02 230 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 RAB1BQ9H0U4 201 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 CDH20Q9HBT6 801 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 IL20Q9NYY1 176 aa13.02□□□□□ -0.33
ATG4B-215ENST00000468018 MYEF2Q9P2K5 600 aaKnown RBP13.02□□□□□ -0.33
ATG4B-215ENST00000468018 TIMM10BQ9Y5J6 103 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms