RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CAPGP40121 348 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 RFX3P48380 749 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 KRT6CP48668 564 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 SNU13P55769 128 aaKnown RBP4.64□□□□□ -1.67
PTCD3-207ENST00000467273 PRPS1P60891 318 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 ACTR3P61158 418 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 MYBPC1Q00872 1141 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 SLC18A2Q05940 514 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 LCP2Q13094 533 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 SELENBP1Q13228 472 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 OR4D1Q15615 310 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 TRIP10Q15642 601 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 TRIP13Q15645 432 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-207ENST00000467273 LTB4RQ15722 352 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 SNCBQ16143 134 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 VPS26BQ4G0F5 336 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 CEP78Q5JTW2 689 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 FRG2Q64ET8 278 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 STEAP4Q687X5 459 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 ACSM5Q6NUN0 579 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 FAHD2BQ6P2I3 314 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-207ENST00000467273 RBPMS2Q6ZRY4 209 aaKnown RBP4.64□□□□□ -1.67
PTCD3-207ENST00000467273 KCTD9Q7L273 389 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 COMMD6Q7Z4G1 85 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 TPRA1Q86W33 373 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 UBE2J2Q8N2K1 259 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 WDR31Q8NA23 367 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 BHLHE23Q8NDY6 225 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 SETD9Q8NE22 299 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 NUP37Q8NFH4 326 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 BBS1Q8NFJ9 593 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 APH1AQ96BI3 265 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 TM4SF18Q96CE8 201 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 LRRC58Q96CX6 371 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 FAHD2AQ96GK7 314 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 GPR78Q96P69 363 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF317Q96PQ6 595 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-207ENST00000467273 FRG2BQ96QU4 278 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 TMEM185BQ9H7F4 350 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 RMND5AQ9H871 391 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 NMRAL1Q9HBL8 299 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 SLC17A5Q9NRA2 495 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 SENP1Q9P0U3 644 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 KLHL21Q9UJP4 597 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 UTS2RQ9UKP6 389 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 MOKQ9UQ07 419 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 U3KQV3 271 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 FAM230AA0A1W2PPH8 454 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 NPIPB13A6NJU9 1138 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 NPIPB5A8MRT5 1133 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 NPIPB4C9JG80 1138 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 NDUFAB1O14561 156 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF195O14628 629 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 SHOX2O60902 331 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 MFN2O95140 757 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 CLDN9O95484 217 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 OXSR1O95747 527 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 NUDT17P0C025 328 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 SAGP10523 405 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 PRPH2P23942 346 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 GPR6P46095 362 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 CDKN1BP46527 198 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 EVX1P49640 407 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 KRTAP10-6P60371 365 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 LMO4P61968 165 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 CSNK2A1P68400 391 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF155Q12901 538 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 PCGF3Q3KNV8 242 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 FAM153CQ494X1 144 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 RUNDC3AQ59EK9 446 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 SLC25A53Q5H9E4 307 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 VAX1Q5SQQ9 334 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 GRTP1Q5TC63 336 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 C3orf33Q6P1S2 294 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 TMEM88Q6PEY1 159 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 APOOLQ6UXV4 268 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 C17orf107Q6ZR85 190 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 DCDC5Q6ZRR9 648 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 PDIK1LQ8N165 341 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 CEP112Q8N8E3 955 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 SMYD1Q8NB12 490 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 NHLRC2Q8NBF2 726 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 OR9A2Q8NGT5 310 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 CLDND2Q8NHS1 167 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 B4GALNT2Q8NHY0 566 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 RHEBL1Q8TAI7 183 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 LIPHQ8WWY8 451 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 SLC9A6Q92581 669 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 BCL2L2Q92843 193 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 PPP1R14BQ96C90 147 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 RAB39BQ96DA2 213 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 RNFT2Q96EX2 444 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 CCT8L2Q96SF2 557 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 ATOH8Q96SQ7 321 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 INTS14Q96SY0 518 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 DOK1Q99704 481 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 CCT7Q99832 543 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 CITED1Q99966 193 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 LMF2Q9BU23 707 aaKnown RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF416Q9BWM5 594 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms