RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PLEKP08567 350 aaPredicted RBP2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 RAB3BP20337 219 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 PEX19P40855 299 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 UQCRFS1P47985 274 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 CYB561P49447 251 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 CCR6P51684 374 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 NCBP2P52298 156 aaKnown RBP eCLIP2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 SLC7A9P82251 487 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 SLC25A11Q02978 314 aaKnown RBP2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 TSPO2Q5TGU0 170 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 CMC1Q7Z7K0 106 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 KRTAP11-1Q8IUC1 163 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 ZNF786Q8N393 782 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 STPG2Q8N412 459 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 Q8N976 141 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 Q8N9L7 120 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 OR2A1Q8NGT9 310 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 CREB3L1Q96BA8 519 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 SEH1LQ96EE3 360 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 DUS3LQ96G46 650 aaKnown RBP2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 WFIKKN1Q96NZ8 548 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 TAAR1Q96RJ0 339 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 BPIFA3Q9BQP9 254 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 NCOR1P1Q9H4R4 102 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 RBAKQ9NYW8 714 aaPredicted RBP2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 MTCH1Q9NZJ7 389 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 SLC17A4Q9Y2C5 497 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 PRG3Q9Y2Y8 225 aaPredicted RBP2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 INSRP06213 1382 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 H7C0C1 242 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 DPM1O60762 260 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 CLDN11O75508 207 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 FGF4P08620 206 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 GNAO1P09471 354 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 ANXA8P13928 327 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 F2RP25116 425 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 STOMP27105 288 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 HMOX2P30519 316 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 UBE2AP49459 152 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 ZNF136P52737 540 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 MXD1Q05195 221 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 SELENBP1Q13228 472 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 OR7A5Q15622 319 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 POU2AF1Q16633 256 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 SOHLH1Q5JUK2 328 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 ANXA8L1Q5VT79 327 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 STUMQ69YW2 141 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 TMEM53Q6P2H8 277 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 CMTM1Q8IZ96 169 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 NOXO1Q8NFA2 376 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 OR10J6PQ8NGY7 276 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 ZNF596Q8TC21 504 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 MARCH1Q8TCQ1 289 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 ZFP90Q8TF47 636 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 NRGNQ92686 78 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 XPO6Q96QU8 1125 aaKnown RBP2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 NEUROG2Q9H2A3 272 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 ISYNA1Q9NPH2 558 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 FAM49BQ9NUQ9 324 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 RAB26Q9ULW5 256 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 KCNE3Q9Y6H6 103 aa2.82□□□□□ -1.96
CDC42BPA-211ENST00000466538 KCNE1BA0A087WTH5 132 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 IGHV3-66A0A0C4DH42 116 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 KBTBD11-OT1A0A1B0GTJ5 212 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 LRRIQ4A6NIV6 560 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 SPECC1L-ADORA2AF8WAN1 911 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 H0YIV9 168 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 SERPINE2P07093 398 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 BCKDHBP21953 392 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 WARSP23381 471 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 CDKN2BP42772 138 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 VSX2P58304 361 aaPredicted RBP2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 GGTLC2Q14390 218 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 SPECC1LQ69YQ0 1117 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 TWF2Q6IBS0 349 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 SPESP1Q6UW49 350 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 MICU2Q8IYU8 434 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 SLC34A3Q8N130 599 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 COMMD1Q8N668 190 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 PQLC3Q8N755 202 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 BBOF1Q8ND07 529 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 LYPD6BQ8NI32 183 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 SLC17A9Q9BYT1 436 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 ZYG11BQ9C0D3 744 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 IQCGQ9H095 443 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 TPK1Q9H3S4 243 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 KCNJ16Q9NPI9 418 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 LHX9Q9NQ69 397 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 RABL2AQ9UBK7 228 aaPredicted RBP2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 CLN8Q9UBY8 286 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 MRPS18BQ9Y676 258 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 PLEKHG2Q9H7P9 1386 aa2.81□□□□□ -1.96
CDC42BPA-211ENST00000466538 IGLV4-69A0A075B6H9 119 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 A0A096LNJ9 63 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 TMX2-CTNND1H3BSU7 103 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 EIF3HO15372 352 aaKnown RBP eCLIP2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 HOXC4P09017 264 aaPredicted RBP2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 ACSM4P0C7M7 580 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 CT45A6P0DMU7 189 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 CT45A5P0DMU8 189 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms