RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 TMEM99Q8N816 258 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 ICA1LQ8NDH6 482 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 OR4F6Q8NGB9 312 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 VANGL1Q8TAA9 524 aaPredicted RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 CDS1Q92903 461 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 GIMAP5Q96F15 307 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 RCHY1Q96PM5 261 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 GPR22Q99680 433 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 CPNE1Q99829 537 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 RHOXF2Q9BQY4 288 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 MCRIP2Q9BUT9 160 aaKnown RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 RANBP3Q9H6Z4 567 aaPredicted RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 B3GAT2Q9NPZ5 323 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 CPSF2Q9P2I0 782 aaKnown RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 CLN8Q9UBY8 286 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 TMCO1Q9UM00 188 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 FAF1Q9UNN5 650 aaPredicted RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 CHMP2BQ9UQN3 213 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 SLC35A3Q9Y2D2 325 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 POFUT2Q9Y2G5 429 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 PLXNB1O43157 2135 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 HEATR1Q9H583 2144 aaKnown RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 TET2Q6N021 2002 aaPredicted RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 DNAH9Q9NYC9 4486 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 TMED7-TICAM2A0A0A6YYA0 188 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 LIPT2A6NK58 231 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 NPIPB9F8W1W9 429 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 PHYHO14832 338 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 SURF4O15260 269 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 PAHP00439 452 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 AK1P00568 194 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 THY1P04216 161 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 CHRM4P08173 479 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 CD55P08174 381 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 CD28P10747 220 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 UQCRBP14927 111 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 RYKP34925 604 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 SPRP35270 261 aaPredicted RBP4.78□□□□□ -1.64
NCL-208ENST00000466274 CRATP43155 626 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 PITPNBP48739 271 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 CDH13P55290 713 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 ARL4CP56559 192 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 RAE1P78406 368 aaKnown RBP4.78□□□□□ -1.64
NCL-208ENST00000466274 TNFAIP6P98066 277 aaPredicted RBP4.78□□□□□ -1.64
NCL-208ENST00000466274 TRAF3Q13114 568 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 C1DQ13901 141 aaKnown RBP4.78□□□□□ -1.64
NCL-208ENST00000466274 RAB39AQ14964 217 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 ZMYND11Q15326 602 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 PPP1R7Q15435 360 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 TBC1D28Q2M2D7 210 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 ZNF718Q3SXZ3 478 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 ATP6AP1LQ52LC2 224 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 TCTEX1D4Q5JR98 221 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 PDZK1Q5T2W1 519 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 ZNF626Q68DY1 528 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 FAM71E1Q6IPT2 247 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 ZNF774Q6NX45 483 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 ZER1Q7Z7L7 766 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 SATL1Q86VE3 508 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 RNF130Q86XS8 419 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 ARFGAP2Q8N6H7 521 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 PNLDC1Q8NA58 520 aaKnown RBP4.78□□□□□ -1.64
NCL-208ENST00000466274 SLC30A7Q8NEW0 376 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 C8orf46Q8TAG6 207 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 GATAD1Q8WUU5 269 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 OIT3Q8WWZ8 545 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 LHX4Q969G2 390 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 SAMD8Q96LT4 415 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 ASCL2Q99929 193 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 CITED2Q99967 270 aaPredicted RBP4.78□□□□□ -1.64
NCL-208ENST00000466274 EBPLQ9BY08 206 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 NPFFR1Q9GZQ6 430 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 FAM234AQ9H0X4 552 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 SIGLEC9Q9Y336 463 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 TMED7Q9Y3B3 224 aa4.78□□□□□ -1.64
NCL-208ENST00000466274 TMEM72A0PK05 275 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 STX16-NPEPL1H3BU86 382 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 MANBAO00462 879 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 STX16O14662 325 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 TP73O15350 636 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 SMIM24O75264 130 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 STX11O75558 287 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 MFN2O95140 757 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 HMGN2P05204 90 aaKnown RBP4.77□□□□□ -1.65
NCL-208ENST00000466274 CD1AP06126 327 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 CCDC159P0C7I6 412 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 EEF1B2P24534 225 aaKnown RBP4.77□□□□□ -1.65
NCL-208ENST00000466274 CHATP28329 748 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 IDH2P48735 452 aaKnown RBP4.77□□□□□ -1.65
NCL-208ENST00000466274 NPY4RP50391 375 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 MMP15P51511 669 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 CLDN17P56750 224 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 SSBP2P81877 361 aaPredicted RBP4.77□□□□□ -1.65
NCL-208ENST00000466274 GLO1Q04760 184 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 BTKQ06187 659 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 DLG1Q12959 904 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 LASP1Q14847 261 aaKnown RBP4.77□□□□□ -1.65
NCL-208ENST00000466274 ZNF141Q15928 474 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 GRTP1Q5TC63 336 aa4.77□□□□□ -1.65
NCL-208ENST00000466274 CCDC137Q6PK04 289 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms