RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SLC6A7Q99884 636 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 CMSS1Q9BQ75 279 aaKnown RBP17.83■□□□□ 0.45
SDF4-205ENST00000465727 GRHPRQ9UBQ7 328 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 IGKV1D-42A0A075B6H8 117 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 TRBV6-7A0A0A0MS04 114 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 C9orf170A2RU37 121 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 TVP23AA6NH52 213 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 OR6C76A6NM76 312 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 AKR7A3O95154 331 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 NAT2P11245 290 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 ADAM8P78325 824 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 ADGRE4PQ86SQ3 457 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 FLVCR1-AS1Q8TAF5 88 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 RXFP4Q8TDU9 374 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 PTX4Q96A99 478 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 PTDSS2Q9BVG9 487 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 RNF122Q9H9V4 155 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 VSIG4Q9Y279 399 aa17.83■□□□□ 0.44
SDF4-205ENST00000465727 MEX3AA1L020 520 aaKnown RBP17.82■□□□□ 0.44
SDF4-205ENST00000465727 CCDC85CA6NKD9 419 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 DCTN6O00399 190 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 RENP00797 406 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 DCNP07585 359 aaKnown RBP17.82■□□□□ 0.44
SDF4-205ENST00000465727 FSTP19883 344 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 ITGB8P26012 769 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 PSMB6P28072 239 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 NPBWR1P48145 328 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 KCNJ3P48549 501 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 IL13RA1P78552 427 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 PJVKQ0ZLH3 352 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 AIMP2Q13155 320 aaKnown RBP17.82■□□□□ 0.44
SDF4-205ENST00000465727 ODF4Q2M2E3 257 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 EEF1A1P5Q5VTE0 462 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 RERGQ96A58 199 aaPredicted RBP17.82■□□□□ 0.44
SDF4-205ENST00000465727 TREM1Q9NP99 234 aa17.82■□□□□ 0.44
SDF4-205ENST00000465727 FARSAQ9Y285 508 aaKnown RBP17.82■□□□□ 0.44
SDF4-205ENST00000465727 SERINC4A6NH21 518 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 C4orf47A7E2U8 309 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 GRXCR1A8MXD5 290 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 LINC01387J3KSC0 135 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 KAT7O95251 611 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 CD2P06729 351 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 FBXO45P0C2W1 286 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 RAB5BP61020 215 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 PMPCAQ10713 525 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 PPP1R1AQ13522 171 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 CCINQ13939 588 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 KCNAB1Q14722 419 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 RNASE10Q5GAN6 216 aaKnown RBP17.81■□□□□ 0.44
SDF4-205ENST00000465727 TMEM225Q6GV28 225 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 FBXO46Q6PJ61 603 aaPredicted RBP17.81■□□□□ 0.44
SDF4-205ENST00000465727 SFTPA1Q8IWL2 248 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 OR4N2Q8NGD1 307 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 OTOSQ8NHW6 89 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 ELP5Q8TE02 316 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 ASB17Q8WXJ9 295 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 ANKRD9Q96BM1 317 aaPredicted RBP17.81■□□□□ 0.44
SDF4-205ENST00000465727 LMF1Q96S06 567 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 ZFYVE21Q9BQ24 234 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 OR10H2O60403 315 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 EIF3GO75821 320 aaKnown RBP eCLIP17.81■□□□□ 0.44
SDF4-205ENST00000465727 CRHP06850 196 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 PGAM2P15259 253 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 ARRB1P49407 418 aaPredicted RBP17.81■□□□□ 0.44
SDF4-205ENST00000465727 POLR2GP62487 172 aaKnown RBP eCLIP17.81■□□□□ 0.44
SDF4-205ENST00000465727 CYCSP99999 105 aaKnown RBP17.81■□□□□ 0.44
SDF4-205ENST00000465727 SGCGQ13326 291 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 PLEKHN1Q494U1 663 aaPredicted RBP17.81■□□□□ 0.44
SDF4-205ENST00000465727 FIGLAQ6QHK4 219 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 GRASPQ7Z6J2 395 aaPredicted RBP17.81■□□□□ 0.44
SDF4-205ENST00000465727 PLPP7Q8NBV4 271 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 OR4A4PQ8NGN8 299 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 SCARF2Q96GP6 870 aaPredicted RBP17.81■□□□□ 0.44
SDF4-205ENST00000465727 OR8B4Q96RC9 309 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 CST11Q9H112 138 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 CHMP1AQ9HD42 196 aaPredicted RBP17.81■□□□□ 0.44
SDF4-205ENST00000465727 KLK13Q9UKR3 277 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 EDARQ9UNE0 448 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 DHDHQ9UQ10 334 aa17.81■□□□□ 0.44
SDF4-205ENST00000465727 MRPS2Q9Y399 296 aaKnown RBP17.81■□□□□ 0.44
SDF4-205ENST00000465727 MEGF11A6BM72 1044 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 HIDE1A8MVS5 230 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 FAM25EA8MYX2 175 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 SMAD9O15198 467 aaKnown RBP17.8■□□□□ 0.44
SDF4-205ENST00000465727 HNRNPA1P09651 372 aaKnown RBP eCLIP17.8■□□□□ 0.44
SDF4-205ENST00000465727 ASAH2BP0C7U1 165 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 S1PR1P21453 382 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 GPR18Q14330 331 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 CST6Q15828 149 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 MESTQ5EB52 335 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 TEX30Q5JUR7 227 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 TMEFF1Q8IYR6 380 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 CA13Q8N1Q1 262 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 C10orf53Q8N6V4 93 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 OR6S1Q8NH40 331 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 VSTM2LQ96N03 204 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 NMES1Q9C002 83 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 TWSG1Q9GZX9 223 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 Q9N2J8 555 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 MMP25Q9NPA2 562 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms