RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SGCAQ16586 387 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 SLC35F1Q5T1Q4 408 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 ZBTB46Q86UZ6 589 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 OR6V1Q8N148 313 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 PARP8Q8N3A8 854 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 LRRC18Q8N456 261 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 ATG16L2Q8NAA4 619 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 IL17RDQ8NFM7 739 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 OR52E2Q8NGJ4 325 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 TEX47Q8TBZ9 253 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 FBXO17Q96EF6 278 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 TSSK2Q96PF2 358 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 ZNF556Q9HAH1 456 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 CISD1Q9NZ45 108 aaKnown RBP17.63■□□□□ 0.41
SKA3-205ENST00000465471 B9D1Q9UPM9 204 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 COA3Q9Y2R0 106 aaPredicted RBP17.63■□□□□ 0.41
SKA3-205ENST00000465471 RENP00797 406 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 SERPINA5P05154 406 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 GAAP10253 952 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 DNASE1P24855 282 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 RAB39AQ14964 217 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 KCNMB1Q16558 191 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 PGGHGQ32M88 737 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 TMEM53Q6P2H8 277 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 DNM1P34Q6PK57 102 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 GLB1L2Q8IW92 636 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 DEPDC4Q8N2C3 294 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 SVOPLQ8N434 492 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 ZNF416Q9BWM5 594 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 RPRD1BQ9NQG5 326 aaKnown RBP17.62■□□□□ 0.41
SKA3-205ENST00000465471 FKBP7Q9Y680 259 aa17.62■□□□□ 0.41
SKA3-205ENST00000465471 G3V2T6 193 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 H3BN98 237 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 ZNF35P13682 527 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 ZNF32P17041 273 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 GRK5P34947 590 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 GUCA1AP43080 201 aaPredicted RBP17.61■□□□□ 0.41
SKA3-205ENST00000465471 KEAP1Q14145 624 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 UGT2A3Q6UWM9 527 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 SYT9Q86SS6 491 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 DTX2Q86UW9 622 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 ZDHHC13Q8IUH4 622 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 C10orf67Q8IYJ2 551 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 SLC37A3Q8NCC5 494 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 NUP37Q8NFH4 326 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 SMAP2Q8WU79 429 aaPredicted RBP17.61■□□□□ 0.41
SKA3-205ENST00000465471 PKP2Q99959 881 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 DHRS9Q9BPW9 319 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 WACQ9BTA9 647 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 RBM4Q9BWF3 364 aaKnown RBP17.61■□□□□ 0.41
SKA3-205ENST00000465471 NMNAT2Q9BZQ4 307 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 PAPOLBQ9NRJ5 636 aaKnown RBP17.61■□□□□ 0.41
SKA3-205ENST00000465471 CMC2Q9NRP2 79 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 KLHL21Q9UJP4 597 aa17.61■□□□□ 0.41
SKA3-205ENST00000465471 TMCC2O75069 709 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 SOD3P08294 240 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 ZNF23P17027 643 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 LSM6P62312 80 aaKnown RBP17.6■□□□□ 0.41
SKA3-205ENST00000465471 CDK5Q00535 292 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 HGFACQ04756 655 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 DBPQ10586 325 aaPredicted RBP17.6■□□□□ 0.41
SKA3-205ENST00000465471 ZSCAN26Q16670 478 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 KDM4DQ6B0I6 523 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 ZNF544Q6NX49 715 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 SLC27A4Q6P1M0 643 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 IQCF1Q8N6M8 205 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 CYB561A3Q8NBI2 242 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 OR4F15Q8NGB8 312 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 FOXN4Q96NZ1 517 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 CCL19Q99731 98 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 KCNS3Q9BQ31 491 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 SEMA6AQ9H2E6 1030 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 KCNN2Q9H2S1 579 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 C1orf198Q9H425 327 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 FN3KQ9H479 309 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 SLC25A19Q9HC21 320 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 EMC7Q9NPA0 242 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 CCNB1IP1Q9NPC3 277 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 KIF17Q9P2E2 1029 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 POU2F3Q9UKI9 436 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 OAZ3Q9UMX2 235 aa17.6■□□□□ 0.41
SKA3-205ENST00000465471 PCBD1P61457 104 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 NKX6-1P78426 367 aaPredicted RBP17.59■□□□□ 0.41
SKA3-205ENST00000465471 PSG4Q00888 419 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 CRMP1Q14194 572 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 GINS1Q14691 196 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 DEFB113Q30KQ7 82 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 PABPC1L2AQ5JQF8 200 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 ACSM5Q6NUN0 579 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 CPEB3Q8NE35 698 aaKnown RBP17.59■□□□□ 0.41
SKA3-205ENST00000465471 SLC26A10Q8NG04 563 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 C11orf40Q8WZ69 217 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 PIGTQ969N2 578 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 GRIP2Q9C0E4 1043 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 OR2H1Q9GZK4 316 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 WNT5BQ9H1J7 359 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 CXXC4Q9H2H0 198 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 RERGLQ9H628 205 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 RNF121Q9H920 327 aa17.59■□□□□ 0.41
SKA3-205ENST00000465471 S100A14Q9HCY8 104 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms