RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 KDELR3O43731 214 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 SMC2O95347 1197 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 INSP01308 110 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 ZNF17P17021 662 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 BCKDHBP21953 392 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 PRDX3P30048 256 aaKnown RBP3.18□□□□□ -1.9
USP25-207ENST00000464435 LCN1P31025 176 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 CX3CR1P49238 355 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 KRTAP10-8P60410 259 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 RAD51Q06609 339 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 CKAP4Q07065 602 aaKnown RBP3.18□□□□□ -1.9
USP25-207ENST00000464435 XKR4Q5GH76 650 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 SPECC1LQ69YQ0 1117 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 H3F3CQ6NXT2 135 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 TRMT10CQ7L0Y3 403 aaKnown RBP3.18□□□□□ -1.9
USP25-207ENST00000464435 NIPA1Q7RTP0 329 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 PUSL1Q8N0Z8 303 aaKnown RBP3.18□□□□□ -1.9
USP25-207ENST00000464435 LINC00469Q8N7U9 141 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 FBXO36Q8NEA4 188 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 FBXL13Q8NEE6 735 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 CA5BP1Q8WTZ4 195 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 PIH1D2Q8WWB5 315 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 MYDGFQ969H8 173 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 ITFG2Q969R8 447 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 CCDC126Q96EE4 140 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 JSRP1Q96MG2 331 aaPredicted RBP3.18□□□□□ -1.9
USP25-207ENST00000464435 FAM210AQ96ND0 272 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 SORT1Q99523 831 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 TMEM59Q9BXS4 323 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 HES7Q9BYE0 225 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 MFFQ9GZY8 342 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 OR2AG1Q9H205 316 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 DMAP1Q9NPF5 467 aaPredicted RBP3.18□□□□□ -1.9
USP25-207ENST00000464435 ZC4H2Q9NQZ6 224 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 MMP26Q9NRE1 261 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 SAMSN1Q9NSI8 373 aaKnown RBP3.18□□□□□ -1.9
USP25-207ENST00000464435 CALYQ9NYX4 217 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 STOX2Q9P2F5 926 aaPredicted RBP3.18□□□□□ -1.9
USP25-207ENST00000464435 CELA1Q9UNI1 258 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 KPTNQ9Y664 436 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 CDHR2Q9BYE9 1310 aa3.18□□□□□ -1.9
USP25-207ENST00000464435 GSTTP1A0A1W2PQM5 241 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 IQCF5A8MTL0 148 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 RAB29O14966 203 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 AIREO43918 545 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 CCNB2O95067 398 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 IGHV2-5P01817 119 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 FGF1P05230 155 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 SERPINE2P07093 398 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 GIPP09681 153 aaPredicted RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 CMA1P23946 247 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 CD82P27701 267 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 NAA10P41227 235 aaPredicted RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 NPBWR2P48146 333 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 MRPL19P49406 292 aaKnown RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 AP1ARQ63HQ0 302 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 REEP3Q6NUK4 255 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 ULK3Q6PHR2 472 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 C6orf89Q6UWU4 347 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 NDUFAF7Q7L592 441 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 MRPL21Q7Z2W9 205 aaKnown RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 THOC6Q86W42 341 aaKnown RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 RBM45Q8IUH3 476 aaKnown RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 CMTM8Q8IZV2 173 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 ARHGAP18Q8N392 663 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 FAM86B1Q8N7N1 296 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 ZNF557Q8N988 423 aaPredicted RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 INO80EQ8NBZ0 244 aaPredicted RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 ANGPTL6Q8NI99 470 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 PLPPR1Q8TBJ4 325 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 NDRG1Q92597 394 aaKnown RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 HSFY1Q96LI6 401 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 RIOK2Q9BVS4 552 aaKnown RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 HINT2Q9BX68 163 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 OR11A1Q9GZK7 315 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 EML4Q9HC35 981 aaKnown RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 MYEF2Q9P2K5 600 aaKnown RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 DDX19BQ9UMR2 479 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 PRG3Q9Y2Y8 225 aaPredicted RBP3.17□□□□□ -1.9
USP25-207ENST00000464435 SLC25A15Q9Y619 301 aa3.17□□□□□ -1.9
USP25-207ENST00000464435 ARHGAP21Q5T5U3 1957 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 KCNE1BA0A087WTH5 132 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 GOLGA8QA0A0J9YX86 632 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 A0A1W2PRD5 423 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 TRPC5OSA6NMA1 111 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 GJE1A6NN92 205 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 SIRPB1O00241 398 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 CCL21O00585 134 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 PPP1R2P9O14990 202 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 HSBP1O75506 76 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 ERLIN2O94905 339 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 ALDOBP05062 364 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 CCL2P13500 99 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 ZNF43P17038 809 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 SLC2A5P22732 501 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 CCNE1P24864 410 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 DCKP27707 260 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 TMED10P49755 219 aaKnown RBP3.16□□□□□ -1.9
USP25-207ENST00000464435 CLDN18P56856 261 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 PSMC5P62195 406 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms