RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 GUCA1AP43080 201 aaPredicted RBP12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 SLC9A3P48764 834 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 GDI2P50395 445 aaKnown RBP12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 CTXN1P60606 82 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 PCBD1P61457 104 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 CCL8P80075 99 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 PSG4Q00888 419 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 PRKCDQ05655 676 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 TOP3AQ13472 1001 aaPredicted RBP12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 FHL1Q13642 323 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 TRAM2Q15035 370 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 ALKBH6Q3KRA9 238 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 NRMQ8IXM6 262 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 SLC15A3Q8IY34 581 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 ALDH16A1Q8IZ83 802 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 OR51F2Q8NH61 342 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 GEMIN6Q8WXD5 167 aaKnown RBP12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 NSMAFQ92636 917 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 RCN3Q96D15 328 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 WACQ9BTA9 647 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 FNDC11Q9BVV2 318 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 MAN2C1Q9NTJ4 1040 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 HIF1ANQ9NWT6 349 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 TREM2Q9NZC2 230 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 GRIP1Q9Y3R0 1128 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 TIMM10BQ9Y5J6 103 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 IGHV1-69-2A0A0G2JMI3 117 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 C5orf49A4QMS7 147 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 WNT9BO14905 357 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 MAKP20794 623 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 CCNOP22674 350 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 LAP3P28838 519 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 GCH1P30793 250 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 LIPAP38571 399 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 WNT5AP41221 380 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 LIPEQ05469 1076 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 SF3A3Q12874 501 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 SCGB2A2Q13296 93 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 MBNL2Q5VZF2 373 aaKnown RBP12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 CBLL1Q75N03 491 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 VTCN1Q7Z7D3 282 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 SYT9Q86SS6 491 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 OAFQ86UD1 273 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 ZNF101Q8IZC7 436 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 ICA1LQ8NDH6 482 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 OR51A7Q8NH64 312 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 AKR7LQ8NHP1 331 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 ACOT11Q8WXI4 607 aaPredicted RBP12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 MARS2Q96GW9 593 aaKnown RBP12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 HOPXQ9BPY8 73 aaPredicted RBP12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 OR2H1Q9GZK4 316 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 WNT5BQ9H1J7 359 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 NARFLQ9H6Q4 476 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 CYSLTR2Q9NS75 346 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 DECR2Q9NUI1 292 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 ARMCX1Q9P291 453 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 SNX13Q9Y5W8 968 aa12.24□□□□□ -0.45
SNRNP40-203ENST00000463988 ANK2Q01484 3957 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 TRAV27A0A087WT01 109 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 A0A0A6YYJ9 748 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 TRAV20A0A0B4J274 112 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 EFCAB9A8MZ26 197 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 CXCR6O00574 342 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 NDUFAB1O14561 156 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 FFAR1O14842 300 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 AHCYL1O43865 530 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 CDC14BO60729 498 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 PRSS23O95084 383 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 ADH4P08319 380 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 FUT4P22083 530 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 ZNF81P51508 661 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 MMP15P51511 669 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 ERVK-25P63136 954 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 SRSF2Q01130 221 aaKnown RBP12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 IFI44LQ53G44 452 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 RINLQ6ZS11 566 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 TMPRSS11FQ6ZWK6 438 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 MBOAT2Q6ZWT7 520 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 TEX29Q8N6K0 151 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 POU5F2Q8N7G0 328 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 ELMOD3Q96FG2 381 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 LRRC37BQ96QE4 947 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 ANKRD19PQ9H560 264 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 SAP30LQ9HAJ7 183 aa12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
SNRNP40-203ENST00000463988 A0A087WUU8 490 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 PLSCR5A0PG75 271 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 C12orf71A8MTZ7 269 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 CLDN25C9JDP6 229 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 J3KTA2 159 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 GSTA4O15217 222 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 CCDC22O60826 627 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 ZNF682O95780 498 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 COX5BP10606 129 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 COX4I1P13073 169 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 MSR1P21757 451 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 TUBG1P23258 451 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 YAP1P46937 504 aaKnown RBP12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 GUCY1A3Q02108 690 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms