RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PLEKHM3Q6ZWE6 761 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PIWIL3Q7Z3Z3 882 aaKnown RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 YRDCQ86U90 279 aaKnown RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SLC22A16Q86VW1 577 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 GRAMD2AQ8IUY3 354 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 GPALPP1Q8IXQ4 340 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM251Q8N6I4 163 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 NAXEQ8NCW5 288 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SLC7A13Q8TCU3 470 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 GEMIN6Q8WXD5 167 aaKnown RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ARL5BQ96KC2 179 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PRRC1Q96M27 445 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF607Q96SK3 696 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 NIPSNAP1Q9BPW8 284 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TTTY12Q9BZ98 90 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TBL1XR1Q9BZK7 514 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 LAT2Q9GZY6 243 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 MUC13Q9H3R2 512 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 NMNAT1Q9HAN9 279 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 MEPEQ9NQ76 525 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 MED17Q9NVC6 651 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ARMC1Q9NVT9 282 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ADPRHL2Q9NX46 363 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 CALML5Q9NZT1 146 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SELENONQ9NZV5 590 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SPRR3Q9UBC9 169 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 OSGIN1Q9UJX0 560 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 RPS6KA6Q9UK32 745 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SLC7A7Q9UM01 511 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SAMD4AQ9UPU9 718 aaKnown RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 AP3M1Q9Y2T2 418 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 C15orf41Q9Y2V0 281 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SLC6A5Q9Y345 797 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 IFT52Q9Y366 437 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 AP4S1Q9Y587 144 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 HEATR5AQ86XA9 2040 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 MPDZO75970 2070 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 A0A087WUU8 490 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 OR2M5A3KFT3 312 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM247A6NEH6 219 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PRR23D1E9PI22 279 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 M0R129 80 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 CDC42EP2O14613 210 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TLX2O43763 284 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SERPINB7O75635 380 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 BAG2O95816 211 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 CST1P01037 141 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 IFNW1P05000 195 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ITGA5P08648 1049 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PRR23D2P0DMB1 279 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 CBLP22681 906 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 EPHA2P29317 976 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 KRT20P35900 424 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 GPR4P46093 362 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PCYT1AP49585 367 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 P2RX1P51575 399 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SUCLG1P53597 346 aaKnown RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PSMD4P55036 377 aaKnown RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 CLDN20P56880 219 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 FXYD6P3P58550 94 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 CHRNB3Q05901 458 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ACKR1Q16570 336 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 CTU2Q2VPK5 515 aaKnown RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 KRTAP24-1Q3LI83 254 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 WLSQ5T9L3 541 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 OR2T5Q6IEZ7 315 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SLC30A6Q6NXT4 461 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SLC46A3Q7Z3Q1 461 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ZER1Q7Z7L7 766 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 CYP4Z1Q86W10 505 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PLCZ1Q86YW0 608 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SLC30A8Q8IWU4 369 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 OFCC1Q8IZS5 231 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 LRRC17Q8N6Y2 441 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ICA1LQ8NDH6 482 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 C7orf57Q8NEG2 295 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 FAM83FQ8NEG4 500 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ATP6V1C2Q8NEY4 427 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TNIP2Q8NFZ5 429 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 OR2T29Q8NH02 315 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 OR5W2Q8NH69 310 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PROX1Q92786 737 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF566Q969W8 418 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TMCO6Q96DC7 493 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 KTI12Q96EK9 354 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SLC41A3Q96GZ6 507 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM41AQ96HV5 264 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 CIB1Q99828 191 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF426Q9BUY5 554 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PLA2G12AQ9BZM1 189 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TRIM15Q9C019 465 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 MAGIXQ9H6Y5 334 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 COQ10BQ9H8M1 238 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 RNPEPL1Q9HAU8 725 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ACKR4Q9NPB9 350 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 EXOSC3Q9NQT5 275 aaKnown RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF701Q9NV72 531 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TAS2R10Q9NYW0 307 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 BAG5Q9UL15 447 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 KIAA1549Q9HCM3 1950 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms