RNA–Protein interactions for RNA: ENST00000463421.1

NFX1-204, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 3

Gene NFX1, Length 987 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-204	ENST00000463421	LOC100509620	A0A075B734	347 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	DNAJC9-AS1	A6NH13	148 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	ADH4	P08319	380 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	ZFP36	P26651	326 aa	Known RBP	12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	UGT2B15	P54855	530 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	ZMAT1	Q5H9K5	638 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	DLEU7	Q6UYE1	221 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	RFPL4B	Q6ZWI9	263 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	PATL1	Q86TB9	770 aa	Known RBP	12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	C1orf174	Q8IYL3	243 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	DEFB108B	Q8NET1	73 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	AKR7L	Q8NHP1	331 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	ABHD4	Q8TB40	342 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	KLF14	Q8TD94	323 aa	Predicted RBP	12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	SLC26A7	Q8TE54	656 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	NABP1	Q96AH0	204 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	LRRC58	Q96CX6	371 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	C7orf26	Q96N11	449 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	DUX5	Q96PT3	197 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	DIRC2	Q96SL1	478 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	GPA33	Q99795	319 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	PRSS27	Q9BQR3	290 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	C1QTNF5	Q9BXJ0	243 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	PCDHAC1	Q9H158	963 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	MEPE	Q9NQ76	525 aa	Predicted RBP	12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	INIP	Q9NRY2	104 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	PURG	Q9UJV8	347 aa	Known RBP	12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	NUP50	Q9UKX7	468 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	UGT2A1	Q9Y4X1	527 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421	NPTN	Q9Y639	398 aa		12.5	□□□□□ -0.41
NFX1-204	ENST00000463421		H3BSA7	217 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	ERLIN1	O75477	346 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	IGHM	P01871	453 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	CD55	P08174	381 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	SBK2	P0C263	348 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	MTPN	P58546	118 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	PPP1CB	P62140	327 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	ERVK-25	P63136	954 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	PSG4	Q00888	419 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	CD47	Q08722	323 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	SGCA	Q16586	387 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	DHDDS	Q86SQ9	333 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	SLC30A8	Q8IWU4	369 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	SPIC	Q8N5J4	248 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	NSMAF	Q92636	917 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	DCLRE1C	Q96SD1	692 aa	Known RBP	12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	UNKL	Q9H9P5	680 aa	Known RBP	12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	SMURF2	Q9HAU4	748 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	MMP26	Q9NRE1	261 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	PLEK2	Q9NYT0	353 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	ZNF69	Q9UC07	566 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	AUP1	Q9Y679	476 aa		12.49	□□□□□ -0.41
NFX1-204	ENST00000463421	GMNC	A6NCL1	334 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	OR7A10	O76100	309 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	IGHV2-70	P01814	119 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	MT-ND1	P03886	318 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	NR2C1	P13056	603 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	FUT1	P19526	365 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	AQP2	P41181	271 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	ARHGDIA	P52565	204 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	TNFAIP6	P98066	277 aa	Predicted RBP	12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	FMOD	Q06828	376 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	ZNF154	Q13106	437 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	BAMBI	Q13145	260 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	SELPLG	Q14242	412 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	TAF11	Q15544	211 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	TUSC1	Q2TAM9	212 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	SPRN	Q5BIV9	151 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	ARMC4	Q5T2S8	1044 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	TREML4	Q6UXN2	200 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	ALDH16A1	Q8IZ83	802 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	KLHL36	Q8N4N3	616 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	PFN4	Q8NHR9	129 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	RASSF5	Q8WWW0	418 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	HDAC2	Q92769	488 aa	Known RBP	12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	TAMM41	Q96BW9	452 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	TLCD1	Q96CP7	247 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	SGTB	Q96EQ0	304 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	MRI1	Q9BV20	369 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	NANOG	Q9H9S0	305 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	MSL2	Q9HCI7	577 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	NPHS2	Q9NP85	383 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	TMEM106B	Q9NUM4	274 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	DCAF16	Q9NXF7	216 aa		12.48	□□□□□ -0.41
NFX1-204	ENST00000463421	IGKV1D-43	A0A0B4J1Z2	117 aa		12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	TRAPPC2L	H3BP13	241 aa		12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	TIMM8A	O60220	97 aa	Predicted RBP	12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	ICMT	O60725	284 aa		12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	ZNF12	P17014	697 aa		12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	PCGF2	P35227	344 aa		12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	RBM34	P42696	430 aa	Known RBP	12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	TAS2R41	P59536	307 aa		12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	HNRNPA0	Q13151	305 aa	Known RBP	12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	TMEM155	Q4W5P6	130 aa		12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	MTX3	Q5HYI7	312 aa		12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	KLF17	Q5JT82	389 aa	Predicted RBP	12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	INTS11	Q5TA45	600 aa	Known RBP	12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	FAM27B	Q5VT28	67 aa		12.47	□□□□□ -0.41
NFX1-204	ENST00000463421	SLC25A47	Q6Q0C1	308 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms