RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ZNF770Q6IQ21 691 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 LEG1Q6P5S2 330 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 PRSS57Q6UWY2 283 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 RASSF6Q6ZTQ3 369 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 FOXL2NBQ6ZUU3 175 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 PTCHD4Q6ZW05 846 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 SLC30A7Q8NEW0 376 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 NUP37Q8NFH4 326 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 OR4K13Q8NH42 304 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 CACNG6Q9BXT2 260 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 DGCR6LQ9BY27 220 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 GRIP2Q9C0E4 1043 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 SYT4Q9H2B2 425 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 CDH20Q9HBT6 801 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 POLE4Q9NR33 117 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 TBC1D23Q9NUY8 699 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 PMF1-BGLAPU3KQ54 211 aa9.17□□□□□ -0.94
TRAPPC12-213ENST00000461577 C12orf71A8MTZ7 269 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 EBAG9O00559 213 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 MMP7P09237 267 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 OR4A8P0C604 315 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 ZNF35P13682 527 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 HIST1H1CP16403 213 aaKnown RBP9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 CTLA4P16410 223 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 NR4A1P22736 598 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 THBS4P35443 961 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 SERPINF1P36955 418 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 ARHGDIAP52565 204 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 SNRPD2P62316 118 aaKnown RBP9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 ADIPOQQ15848 244 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 PABPC1L2AQ5JQF8 200 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 SLC35F1Q5T1Q4 408 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 C11orf71Q6IPW1 123 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 ZNF584Q8IVC4 421 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 GLB1L2Q8IW92 636 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 ALDH16A1Q8IZ83 802 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 PAPD5Q8NDF8 572 aaKnown RBP9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 WFDC11Q8NEX6 87 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 OR52E2Q8NGJ4 325 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 FOXN4Q96NZ1 517 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 SNX18Q96RF0 628 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 NMNAT3Q96T66 252 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 FEVQ99581 238 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 WACQ9BTA9 647 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 TSSK6Q9BXA6 273 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 NUAK2Q9H093 628 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 ZNF442Q9H7R0 627 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 ZNF556Q9HAH1 456 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 SRA1Q9HD15 236 aaKnown RBP9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 IL20Q9NYY1 176 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 PDP1Q9P0J1 537 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 DNAJB9Q9UBS3 223 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 COA3Q9Y2R0 106 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 CMAHPQ9Y471 501 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 TIMM10BQ9Y5J6 103 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 ARID1AO14497 2285 aa9.16□□□□□ -0.94
TRAPPC12-213ENST00000461577 PLCE1Q9P212 2302 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 ARRDC5A6NEK1 342 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 B9A039 149 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 DEAF1O75398 565 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 TIPRLO75663 272 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 SOX14O95416 240 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 SCG5P05408 212 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 CCL2P13500 99 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 CD99P14209 185 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 CCNOP22674 350 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 APEX1P27695 318 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 GLRXP35754 106 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 GDI2P50395 445 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 RPS23P62266 143 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 PSG4Q00888 419 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 SCRN3Q0VDG4 424 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 COX10Q12887 443 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 ENDOGQ14249 297 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 RAB35Q15286 201 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 UGT2A3Q6UWM9 527 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 SYT9Q86SS6 491 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 KRTAP1-3Q8IUG1 177 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 SDR9C7Q8NEX9 313 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 AKR7LQ8NHP1 331 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 TEX47Q8TBZ9 253 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 SLCO4A1Q96BD0 722 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 Q96MF0 132 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 NIPSNAP1Q9BPW8 284 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 ZNF416Q9BWM5 594 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 PLA2G12AQ9BZM1 189 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 PLK3Q9H4B4 646 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 BARX1Q9HBU1 254 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 EMC7Q9NPA0 242 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 RPRD1BQ9NQG5 326 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 ARMC1Q9NVT9 282 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 GDF2Q9UK05 429 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 B9D1Q9UPM9 204 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 BAIAP2Q9UQB8 552 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 POLR1DQ9Y2S0 133 aa9.15□□□□□ -0.94
TRAPPC12-213ENST00000461577 USF3Q68DE3 2245 aa9.15□□□□□ -0.95
TRAPPC12-213ENST00000461577 OTOGQ6ZRI0 2925 aa9.15□□□□□ -0.95
TRAPPC12-213ENST00000461577 H3BN98 237 aa9.14□□□□□ -0.95
TRAPPC12-213ENST00000461577 BHLHE40O14503 412 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms