RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 NMD3Q96D46 503 aaKnown RBP17.72■□□□□ 0.43
SCAF8-204ENST00000461219 GPX7Q96SL4 187 aaPredicted RBP17.72■□□□□ 0.43
SCAF8-204ENST00000461219 RAB1BQ9H0U4 201 aa17.72■□□□□ 0.43
SCAF8-204ENST00000461219 SYT4Q9H2B2 425 aa17.72■□□□□ 0.43
SCAF8-204ENST00000461219 OR51B6Q9H340 312 aa17.72■□□□□ 0.43
SCAF8-204ENST00000461219 NRIP3Q9NQ35 241 aa17.72■□□□□ 0.43
SCAF8-204ENST00000461219 DLL4Q9NR61 685 aa17.72■□□□□ 0.43
SCAF8-204ENST00000461219 U3KQV3 271 aa17.72■□□□□ 0.43
SCAF8-204ENST00000461219 CHD3Q12873 2000 aaKnown RBP17.71■□□□□ 0.43
SCAF8-204ENST00000461219 KHDRBS3O75525 346 aaKnown RBP17.71■□□□□ 0.43
SCAF8-204ENST00000461219 RENP00797 406 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 LCKP06239 509 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 CST2P09228 141 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 CCL2P13500 99 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 ZNF32P17041 273 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 APEX1P27695 318 aaKnown RBP17.71■□□□□ 0.43
SCAF8-204ENST00000461219 MAGEA2P43356 314 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 EFNA4P52798 201 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 DSCR9P59020 149 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 SELENOVP59797 346 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 TSPAN31Q12999 210 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 EFNB3Q15768 340 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 CARTPTQ16568 116 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 SWI5Q1ZZU3 235 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 RFX4Q33E94 735 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 FAM27BQ5VT28 67 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 RPL13AP3Q6NVV1 102 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 C1orf94Q6P1W5 598 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 CLEC9AQ6UXN8 241 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 SPATA24Q86W54 205 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 ZNF584Q8IVC4 421 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 NABP1Q96AH0 204 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 SAMD8Q96LT4 415 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 ZNF75AQ96N20 296 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 GPA33Q99795 319 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 EIF3KQ9UBQ5 218 aaKnown RBP17.71■□□□□ 0.43
SCAF8-204ENST00000461219 POLR1DQ9Y2S0 133 aa17.71■□□□□ 0.43
SCAF8-204ENST00000461219 CST1P01037 141 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 FAM157BP0CG42 384 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 STOMP27105 288 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 GLRXP35754 106 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 GDI2P50395 445 aaKnown RBP17.7■□□□□ 0.42
SCAF8-204ENST00000461219 RGS7BPQ6MZT1 257 aaPredicted RBP17.7■□□□□ 0.42
SCAF8-204ENST00000461219 PGBD2Q6P3X8 592 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 UNQ6126/PRO20091Q6UXV3 157 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 OR9Q2Q8NGE9 314 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 AKR7LQ8NHP1 331 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 COX4I2Q96KJ9 171 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 FOXN4Q96NZ1 517 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 YY1AP1Q9H869 796 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 POLE4Q9NR33 117 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 TIMM10BQ9Y5J6 103 aa17.7■□□□□ 0.42
SCAF8-204ENST00000461219 A0A1W2PPW3 197 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 DHRS12A0PJE2 317 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 AQP12BA6NM10 295 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 RNF223E7ERA6 249 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 IMPA2O14732 288 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 GPRIN2O60269 458 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 ATP5HO75947 161 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 CSF3P09919 207 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 APEHP13798 732 aaKnown RBP17.69■□□□□ 0.42
SCAF8-204ENST00000461219 HOXB6P17509 224 aaKnown RBP17.69■□□□□ 0.42
SCAF8-204ENST00000461219 CRABP1P29762 137 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 RAD52P43351 418 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 GSSP48637 474 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 PPOXP50336 477 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 HMGA2P52926 109 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 PPP1R8Q12972 351 aaKnown RBP17.69■□□□□ 0.42
SCAF8-204ENST00000461219 MST1LQ2TV78 715 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 LEG1Q6P5S2 330 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 GLB1L2Q8IW92 636 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 AQP12AQ8IXF9 295 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 CIARTQ8N365 385 aaPredicted RBP17.69■□□□□ 0.42
SCAF8-204ENST00000461219 AQP11Q8NBQ7 271 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 FAM168AQ92567 244 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 MRPL24Q96A35 216 aaKnown RBP17.69■□□□□ 0.42
SCAF8-204ENST00000461219 SYT3Q9BQG1 590 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 GSX1Q9H4S2 264 aaPredicted RBP17.69■□□□□ 0.42
SCAF8-204ENST00000461219 EMC7Q9NPA0 242 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 DUSP13Q9UII6 198 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 FZR1Q9UM11 496 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 VPS13CQ709C8 3753 aa17.69■□□□□ 0.42
SCAF8-204ENST00000461219 C5orf49A4QMS7 147 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 F12P00748 615 aaPredicted RBP17.68■□□□□ 0.42
SCAF8-204ENST00000461219 MMP7P09237 267 aaPredicted RBP17.68■□□□□ 0.42
SCAF8-204ENST00000461219 CTLA4P16410 223 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 FXYD6P3P58550 94 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 SCRN3Q0VDG4 424 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 CLEC12AQ5QGZ9 265 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 ZNF620Q6ZNG0 422 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.68■□□□□ 0.42
SCAF8-204ENST00000461219 ZNF525Q8N782 197 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 C11orf40Q8WZ69 217 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 SMR3AQ99954 134 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 ZNF416Q9BWM5 594 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 CHID1Q9BWS9 393 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 REG4Q9BYZ8 158 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 BCL2L14Q9BZR8 327 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 OR2H1Q9GZK4 316 aa17.68■□□□□ 0.42
SCAF8-204ENST00000461219 TBC1D23Q9NUY8 699 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms