RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 CT45A8P0DMV1 189 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 CT45A9P0DMV2 189 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 DCDP81605 110 aaKnown RBP10.55□□□□□ -0.72
NPHP4-204ENST00000460696 CT45A2Q5DJT8 189 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 NPSR1Q6W5P4 371 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 IDO2Q6ZQW0 420 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 RFLNBQ8N5W9 214 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 OR5D18Q8NGL1 313 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 ZFAND1Q8TCF1 268 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 ELP5Q8TE02 316 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 HSD17B8Q92506 261 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 CCDC74AQ96AQ1 378 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 THY1P04216 161 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 AMY2BP19961 511 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 RBMS2Q15434 407 aaKnown RBP10.55□□□□□ -0.72
NPHP4-204ENST00000460696 BEX5Q5H9J7 111 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 DMRTC1Q5HYR2 192 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 OR51S1Q8NGJ8 323 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 SLC6A15Q9H2J7 730 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 TECTAO75443 2155 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 SCN8AQ9UQD0 1980 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 A0A1W2PNR3 127 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 SHISA8B8ZZ34 492 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 FOXS1O43638 330 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 LANCL1O43813 399 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 SCGB1D2O95969 90 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF28P17035 718 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 ITGA3P26006 1051 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 ACAA2P42765 397 aaKnown RBP10.54□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF117Q03924 483 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 PRTGQ2VWP7 1150 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 CD276Q5ZPR3 534 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 SLC25A24Q6NUK1 477 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 CCDC36Q8IYA8 594 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 OR5D14Q8NGL3 314 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 SEC22AQ96IW7 307 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 HRASLSQ9HDD0 168 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 HPF1Q9NWY4 346 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 CHRNA9Q9UGM1 479 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 COL4A6Q14031 1691 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 TRAV1-2A0A0B4J238 106 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 LILRA5A6NI73 299 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 ALOX12BO75342 701 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 MT-ATP6P00846 226 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 SFTPBP07988 381 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 FOLR1P15328 257 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 RAB3AP20336 220 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 TOMM34Q15785 309 aaPredicted RBP10.54□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF141Q15928 474 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 DMKNQ6E0U4 476 aaPredicted RBP10.54□□□□□ -0.72
NPHP4-204ENST00000460696 ALKAL2Q6UX46 152 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 VOPP1Q96AW1 172 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 LRFN5Q96NI6 719 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 SPACA5Q96QH8 159 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 C1orf198Q9H425 327 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 PLEK2Q9NYT0 353 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 TAS2R4Q9NYW5 299 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 MDC1Q14676 2089 aaKnown RBP10.54□□□□□ -0.72
NPHP4-204ENST00000460696 IGHV1OR15-9A0A0B4J2B8 117 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 PRSS37A4D1T9 235 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 WDPCPO95876 746 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 IGHG1P01857 330 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 SPINK2P20155 84 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 ABCD3P28288 659 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 RAD52P43351 418 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF84P51523 738 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 STEAP1BQ6NZ63 245 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 C3P1Q6ZMU1 363 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 H1FNTQ75WM6 255 aaPredicted RBP10.54□□□□□ -0.72
NPHP4-204ENST00000460696 C17orf50Q8WW18 174 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 PNPLA2Q96AD5 504 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 MNTQ99583 582 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 SELENOIQ9C0D9 397 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF160Q9HCG1 818 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 FBXL2Q9UKC9 423 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 OR52A1Q9UKL2 312 aa10.54□□□□□ -0.72
NPHP4-204ENST00000460696 GDF9O60383 454 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 TMEM225BP0DP42 221 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 TAS2R19P59542 299 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 SORDQ00796 357 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 ABCA11PQ4W5N1 156 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF679Q8IYX0 411 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 C12orf45Q8N5I9 185 aaPredicted RBP10.53□□□□□ -0.72
NPHP4-204ENST00000460696 OR1L3Q8NH93 324 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 ZPLD1Q8TCW7 415 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 ST6GALNAC5Q9BVH7 336 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 WWTR1Q9GZV5 400 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 PPP1R3EQ9H7J1 279 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 B9D1Q9UPM9 204 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 SF3B6Q9Y3B4 125 aaKnown RBP10.53□□□□□ -0.72
NPHP4-204ENST00000460696 FRG2CA6NGY1 282 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 OIP5O43482 229 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 WNT1P04628 370 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 NR0B2Q15466 257 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 GRK1Q15835 563 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 SWI5Q1ZZU3 235 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 ELP2Q6IA86 826 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 RAB12Q6IQ22 244 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 FAM57BQ71RH2 274 aa10.53□□□□□ -0.72
NPHP4-204ENST00000460696 RABEPKQ7Z6M1 372 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms