RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 IMPA2O14732 288 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 ARPC3O15145 178 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 PTHP01270 115 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 OR4A8P0C604 315 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 SLC6A6P31641 620 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 LCN6P62502 163 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 SNTB2Q13425 540 aaKnown RBP14.98□□□□□ -0.01
USP39-208ENST00000455732 DAG1Q14118 895 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 LRRC18Q8N456 261 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 KCNN2Q9H2S1 579 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 RNF121Q9H920 327 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 FBXO9Q9UK97 447 aaPredicted RBP14.98□□□□□ -0.01
USP39-208ENST00000455732 SPEF1Q9Y4P9 236 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 IER3IP1Q9Y5U9 82 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 ATP5HO75947 161 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 CCNB2O95067 398 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 SNAP29O95721 258 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 CST2P09228 141 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 MSR1P21757 451 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 THBS4P35443 961 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 GUCA1AP43080 201 aaPredicted RBP14.97□□□□□ -0.01
USP39-208ENST00000455732 SNRPD2P62316 118 aaKnown RBP14.97□□□□□ -0.01
USP39-208ENST00000455732 FLOT2Q14254 428 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 RPL13AP3Q6NVV1 102 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 SLC30A7Q8NEW0 376 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 OR9Q2Q8NGE9 314 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 CANT1Q8WVQ1 401 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 FBXO17Q96EF6 278 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 SNX18Q96RF0 628 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 WACQ9BTA9 647 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 CHID1Q9BWS9 393 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 PLK3Q9H4B4 646 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 REEP1Q9H902 201 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 POLE4Q9NR33 117 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 VNN3Q9NY84 501 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 SLC7A8Q9UHI5 535 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 POMPQ9Y244 141 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 SAMHD1Q9Y3Z3 626 aaKnown RBP14.97□□□□□ -0.01
USP39-208ENST00000455732 PMF1-BGLAPU3KQ54 211 aa14.97□□□□□ -0.01
USP39-208ENST00000455732 TCRBV3S1A0A5B6 114 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 VSTM5A8MXK1 200 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 GSC2O15499 205 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 PPP1R3DO95685 299 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 CTLA4P16410 223 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 LAP3P28838 519 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 GLRXP35754 106 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 RASSF2P50749 326 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 RPS23P62266 143 aaKnown RBP14.96□□□□□ -0.01
USP39-208ENST00000455732 PLP2Q04941 152 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 SGCAQ16586 387 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 MICAQ29983 383 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 KRT80Q6KB66 452 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 VHLLQ6RSH7 139 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 PTCHD4Q6ZW05 846 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 SYT9Q86SS6 491 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 CADM1Q9BY67 442 aaKnown RBP14.96□□□□□ -0.01
USP39-208ENST00000455732 SYT4Q9H2B2 425 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 CCNB1IP1Q9NPC3 277 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 CDH10Q9Y6N8 788 aa14.96□□□□□ -0.01
USP39-208ENST00000455732 SONP18583 2426 aaKnown RBP14.96□□□□□ -0.01
USP39-208ENST00000455732 IQCMA0A1B0GVH7 501 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 A0A1W2PPL8 197 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 SOCS2O14508 198 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 IDH3BO43837 385 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 ZNF32P17041 273 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 CDKN2AP42771 156 aaKnown RBP14.95□□□□□ -0.02
USP39-208ENST00000455732 PPOXP50336 477 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 PCBD1P61457 104 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 GALK2Q01415 458 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 HSF2Q03933 536 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 ENDOGQ14249 297 aaKnown RBP14.95□□□□□ -0.02
USP39-208ENST00000455732 RAB35Q15286 201 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 TBC1D28Q2M2D7 210 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 PABPC1L2AQ5JQF8 200 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 RASSF6Q6ZTQ3 369 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 AQP11Q8NBQ7 271 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 OR1J2Q8NGS2 313 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 SAMD8Q96LT4 415 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 ERMAPQ96PL5 475 aaPredicted RBP14.95□□□□□ -0.02
USP39-208ENST00000455732 DGCR6LQ9BY27 220 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 REG4Q9BYZ8 158 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 IL20Q9NYY1 176 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 CMAHPQ9Y471 501 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 DNHD1Q96M86 4753 aa14.95□□□□□ -0.02
USP39-208ENST00000455732 ARRDC5A6NEK1 342 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 RNF223E7ERA6 249 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 SSX4O60224 188 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 GPRIN2O60269 458 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 KHDRBS3O75525 346 aaKnown RBP14.94□□□□□ -0.02
USP39-208ENST00000455732 GASTP01350 101 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 PCSK6P29122 969 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 CRABP1P29762 137 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 EVX1P49640 407 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 PSG4Q00888 419 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 KRTAP1-1Q07627 177 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 SPATA24Q86W54 205 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 GLB1L2Q8IW92 636 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 PAQR4Q8N4S7 273 aaPredicted RBP14.94□□□□□ -0.02
USP39-208ENST00000455732 CPEB3Q8NE35 698 aaKnown RBP14.94□□□□□ -0.02
USP39-208ENST00000455732 OR52L1Q8NGH7 329 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms