RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 OR2T7P0C7T2 308 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 OR8G3PP0DMU2 310 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 ADRA2CP18825 462 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST1H2BOP23527 126 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 ZBTB25P24278 435 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 IL2RGP31785 369 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST1H2BBP33778 126 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 CD200P41217 278 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 FRKP42685 505 aaPredicted RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 PPICP45877 212 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 ID4P47928 161 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 CRYBB1P53674 252 aaPredicted RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 PRKAG1P54619 331 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST1H2BDP58876 126 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 TBPL1P62380 186 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST1H2BCP62807 126 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 SNRPNP63162 240 aaKnown RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 NKX6-1P78426 367 aaPredicted RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 HNF4GQ14541 408 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST2H2BEQ16778 126 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 ODF4Q2M2E3 257 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 C14orf28Q4W4Y0 310 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 ARHGAP40Q5TG30 622 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 CD300LGQ6UXG3 332 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 C16orf59Q7L2K0 433 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 BIVMQ86UB2 503 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 CD163Q86VB7 1156 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 ZNF227Q86WZ6 799 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 SLC35F3Q8IY50 421 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 GPR137CQ8N3F9 429 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 ARL14Q8N4G2 192 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 OR2T27Q8NH04 317 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST1H2BHQ93079 126 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 MR1Q95460 341 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 SLC22A18Q96BI1 424 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 WDR34Q96EX3 536 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 MCHR1Q99705 422 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST1H2BNQ99877 126 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST1H2BMQ99879 126 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 DDA1Q9BW61 102 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 GPR174Q9BXC1 333 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 KLHL28Q9NXS3 571 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 PRODH2Q9UF12 536 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 DYRK1BQ9Y463 629 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 TRBV23OR9-2A0A075B6M9 112 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 C13orf42A0A1B0GVH6 325 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 MSGN1A6NI15 193 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 P2RX6O15547 441 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 TBX19O60806 448 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 PTBP3O95758 552 aaKnown RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 NPPBP16860 134 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 S1PR1P21453 382 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 FGF7P21781 194 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 HTR2CP28335 458 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 NAA10P41227 235 aaPredicted RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 SULT1A2P50226 295 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 EFNB2P52799 333 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 SCAND1P57086 179 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 IL13RA1P78552 427 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 SRSF5Q13243 272 aaKnown RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 PPP1R1AQ13522 171 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 SLC9A5Q14940 896 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 ZNF674Q2M3X9 581 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 Q6ZRG5 221 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 KCTD9Q7L273 389 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 CDK20Q8IZL9 346 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 TMEM229BQ8NBD8 167 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 OR4C6Q8NH72 309 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 OR5K2Q8NHB8 316 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 GPX8Q8TED1 209 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 TM4SF18Q96CE8 201 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 NTNG2Q96CW9 530 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 ZMYND19Q96E35 227 aaPredicted RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 RBM18Q96H35 190 aaKnown RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 PACRGQ96M98 296 aaPredicted RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 CNN2Q99439 309 aaKnown RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 CDC6Q99741 560 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 RNF126Q9BV68 326 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 KATNBL1Q9H079 304 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 CWH43Q9H720 699 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 DNAJB11Q9UBS4 358 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 FBXL21Q9UKT6 434 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 MMP24Q9Y5R2 645 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 CASP8AP2Q9UKL3 1982 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 PLXND1Q9Y4D7 1925 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 TSPAN11A1L157 253 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 SMCO3A2RU48 225 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 TMEM202A6NGA9 273 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 RTCAO00442 366 aaKnown RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 PLPP1O14494 284 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 SOX15O60248 233 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 ZFPL1O95159 310 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 RCBTB2O95199 551 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 LASP1Q14847 261 aaKnown RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 UBE2V2Q15819 145 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 AKR1C8PQ5T2L2 129 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 KHDRBS2Q5VWX1 349 aaKnown RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 RFLNAQ6ZTI6 216 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms