RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 LAP3P28838 519 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 GDI2P50395 445 aaKnown RBP13.1□□□□□ -0.31
CHD3-205ENST00000449744 PCBD1P61457 104 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 ERVS71-1P61550 626 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 ERVK-25P63136 954 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 KRT72Q14CN4 511 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 MOGQ16653 247 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 FGD3Q5JSP0 725 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 UNQ6126/PRO20091Q6UXV3 157 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 TMPRSS11FQ6ZWK6 438 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 CXXC5Q7LFL8 322 aaKnown RBP13.1□□□□□ -0.31
CHD3-205ENST00000449744 ALDH16A1Q8IZ83 802 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 CLDN22Q8N7P3 220 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 ARIH2OSQ8N7S6 290 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 CPEB3Q8NE35 698 aaKnown RBP13.1□□□□□ -0.31
CHD3-205ENST00000449744 OR1J1Q8NGS3 322 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 RDH5Q92781 318 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 SNX18Q96RF0 628 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 KRCC1Q9NPI7 259 aaPredicted RBP13.1□□□□□ -0.31
CHD3-205ENST00000449744 SLCO1C1Q9NYB5 712 aa13.1□□□□□ -0.31
CHD3-205ENST00000449744 C5orf49A4QMS7 147 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 XKRYO14609 159 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 LILRA1O75019 489 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 HPXP02790 462 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 MT-ND5P03915 603 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 CD14P08571 375 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 CST2P09228 141 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 TACSTD2P09758 323 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 ZNF250P15622 560 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 RHCEP18577 417 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 HNF1AP20823 631 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 PSG4Q00888 419 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 RIN1Q13671 783 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 ELFN2Q5R3F8 820 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 TMEM154Q6P9G4 183 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 RNF148Q8N7C7 305 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 AKR7LQ8NHP1 331 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 SLC7A13Q8TCU3 470 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 HPS1Q92902 700 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 FAM46AQ96IP4 442 aaKnown RBP13.09□□□□□ -0.31
CHD3-205ENST00000449744 HINT3Q9NQE9 182 aaKnown RBP13.09□□□□□ -0.31
CHD3-205ENST00000449744 DCAF13Q9NV06 445 aaKnown RBP13.09□□□□□ -0.31
CHD3-205ENST00000449744 AURKCQ9UQB9 309 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 TIMM10BQ9Y5J6 103 aa13.09□□□□□ -0.31
CHD3-205ENST00000449744 IGLV3-9A0A075B6K5 115 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 A0A1W2PRQ8 180 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 C12orf71A8MTZ7 269 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 C17orf100A8MU93 164 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 H7C1C5 153 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 CDC42EP2O14613 210 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 MSR1P21757 451 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 ACHEP22303 614 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 IGFBP5P24593 272 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 COL8A2P25067 703 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 GCH1P30793 250 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 GPR6P46095 362 aaPredicted RBP13.08□□□□□ -0.32
CHD3-205ENST00000449744 LCN6P62502 163 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 FHL1Q13642 323 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 DGCR6Q14129 220 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 TRIP10Q15642 601 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 UGT2A3Q6UWM9 527 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 FAM156AQ8NDB6 213 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 POM121L2Q96KW2 1035 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 Q96M85 177 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 ZNF570Q96NI8 536 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 OR2H1Q9GZK4 316 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 NDUFAF4Q9P032 175 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 ADAM18Q9Y3Q7 739 aa13.08□□□□□ -0.32
CHD3-205ENST00000449744 ANK3Q12955 4377 aaKnown RBP13.08□□□□□ -0.32
CHD3-205ENST00000449744 AHCYL1O43865 530 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 NDUFB2O95178 105 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 ITGA2P17301 1181 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 SRD5A1P18405 259 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 MAGEB1P43366 347 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 GNGT1P63211 74 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 MRPS11P82912 194 aaKnown RBP13.07□□□□□ -0.32
CHD3-205ENST00000449744 PCGF3Q3KNV8 242 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 ZNF718Q3SXZ3 478 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 FAM120AOSQ5T036 256 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 FOXL2NBQ6ZUU3 175 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 TSEN54Q7Z6J9 526 aaKnown RBP13.07□□□□□ -0.32
CHD3-205ENST00000449744 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 SOX7Q9BT81 388 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 ZNF416Q9BWM5 594 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 WNT5BQ9H1J7 359 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 GORASP2Q9H8Y8 452 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 POLE4Q9NR33 117 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 MAGEL2Q9UJ55 1249 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 SIGLEC7Q9Y286 467 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 V9GYQ6 96 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 COL6A5A8TX70 2615 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 ATRQ13535 2644 aa13.07□□□□□ -0.32
CHD3-205ENST00000449744 LOC100509620A0A075B734 347 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 TEX13CA0A0J9YWL9 993 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 RNF212BA8MTL3 300 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 TPD52L2O43399 206 aaKnown RBP13.06□□□□□ -0.32
CHD3-205ENST00000449744 PPIHO43447 177 aaKnown RBP13.06□□□□□ -0.32
CHD3-205ENST00000449744 NCR1O76036 304 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms