RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	TXNIP	Q9H3M7	391 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	FN3KRP	Q9HA64	309 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	SIAE	Q9HAT2	523 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	TRIM36	Q9NQ86	728 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	DEPP	Q9NTK1	212 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	TREM2	Q9NZC2	230 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	PRSS50	Q9UI38	385 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	METRN	Q9UJH8	293 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	GTF3C1	Q12789	2109 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	ADAM20	O43506	726 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	IFNA6	P05013	189 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	CCL2	P13500	99 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	GPX2	P18283	190 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	STOM	P27105	288 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	SELENOP	P49908	381 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	DCTN2	Q13561	401 aa	Known RBP	7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	ZNF141	Q15928	474 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	DUSP7	Q16829	419 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	SPATS1	Q496A3	300 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	DPY19L2P2	Q6ZN68	376 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	MBOAT2	Q6ZWT7	520 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	AHSA2	Q719I0	299 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	DPY19L4	Q7Z388	723 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	OR8B3	Q8NGG8	313 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	TMIGD2	Q96BF3	282 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	RASD2	Q96D21	266 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	OR8B2	Q96RD0	313 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	COQ7	Q99807	217 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	KAT8	Q9H7Z6	458 aa	Known RBP	7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	SLC7A10	Q9NS82	523 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	ZNF355P	Q9NSJ1	428 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	ARMC1	Q9NVT9	282 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	GPATCH2	Q9NW75	528 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	CLN8	Q9UBY8	286 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544		H7C1Q1	480 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	PMS2P2	O95744	297 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	PDGFA	P04085	211 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	GLRA1	P23415	457 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	PRPH2	P23942	346 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	GABRA4	P48169	554 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	GZMK	P49863	264 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	TAB1	Q15750	504 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	CLEC9A	Q6UXN8	241 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	USP51	Q70EK9	711 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	GLCCI1	Q86VQ1	547 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	NFAM1	Q8NET5	270 aa	Predicted RBP	7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	CSNK2A3	Q8NEV1	391 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	SNX18	Q96RF0	628 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	SCOC	Q9UIL1	159 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	ADAM30	Q9UKF2	790 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	CSF3	P09919	207 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	ZNF32	P17041	273 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	NFYB	P25208	207 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	APOBEC3A	P31941	199 aa	Predicted RBP	7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	TSPAN5	P62079	268 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	CLEC12B	Q2HXU8	276 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	CHRFAM7A	Q494W8	412 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	ZNF658B	Q4V348	819 aa	Predicted RBP	7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	TIMM23B	Q5SRD1	257 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	OR2T2	Q6IF00	324 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	NUFIP2	Q7Z417	695 aa	Known RBP	7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	NKAIN4	Q8IVV8	208 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	IQCF1	Q8N6M8	205 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	SIMC1	Q8NDZ2	872 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	OR9Q2	Q8NGE9	314 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	HTRA1	Q92743	480 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	ADIPOR1	Q96A54	375 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	WDYHV1	Q96HA8	205 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	LRR1	Q96L50	414 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	MYOZ1	Q9NP98	299 aa	Predicted RBP	7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	CCM2L	Q9NUG4	571 aa	Predicted RBP	7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	TAS2R1	Q9NYW7	299 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	ABRACL	Q9P1F3	81 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	WDR81	Q562E7	1941 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	NUDT19	A8MXV4	375 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	ZNF99	A8MXY4	864 aa	Predicted RBP	7.51	□□□□□ -1.21
HCG18-238	ENST00000449544		B9A039	149 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	ZNF878	C9JN71	531 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	TGM6	O95932	706 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	ZNF16	P17020	682 aa	Predicted RBP	7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	CRISP1	P54107	249 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	PPP1CB	P62140	327 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	IKZF1	Q13422	519 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544		Q5PR19	223 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	MDS2	Q8NDY4	140 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	OIT3	Q8WWZ8	545 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	LRTOMT	Q8WZ04	291 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	ATF6B	Q99941	703 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	TXLNGY	Q9BZA5	131 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	DLL4	Q9NR61	685 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	VNN3	Q9NY84	501 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	CRIM1	Q9NZV1	1036 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	GNG12	Q9UBI6	72 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	SLC7A8	Q9UHI5	535 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	POMP	Q9Y244	141 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	DOCK10	Q96BY6	2186 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	FAM183A	A6NL82	134 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	PRODH	O43272	600 aa		7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	ENSA	O43768	121 aa	Known RBP	7.51	□□□□□ -1.21
HCG18-238	ENST00000449544	IL18BP	O95998	194 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms