RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 ACTA2P62736 377 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 ACTG2P63267 376 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 PON3Q15166 354 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 NKPD1Q17RQ9 610 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 MRPL2Q5T653 305 aaKnown RBP7.36□□□□□ -1.23
LINC00954-202ENST00000449086 PRAMEF17Q5VTA0 474 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 FIGNL1Q6PIW4 674 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 FAM111BQ6SJ93 734 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 SLC36A1Q7Z2H8 476 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 ACOT4Q8N9L9 421 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 TEX19Q8NA77 164 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 INO80EQ8NBZ0 244 aaPredicted RBP7.36□□□□□ -1.23
LINC00954-202ENST00000449086 OR51D1Q8NGF3 324 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 CASTOR1Q8WTX7 329 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 NR4A3Q92570 626 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 APMAPQ9HDC9 416 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 MEPEQ9NQ76 525 aaPredicted RBP7.36□□□□□ -1.23
LINC00954-202ENST00000449086 ANKRD10Q9NXR5 420 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 MIOXQ9UGB7 285 aa7.36□□□□□ -1.23
LINC00954-202ENST00000449086 ZNF346Q9UL40 294 aaKnown RBP7.36□□□□□ -1.23
LINC00954-202ENST00000449086 TRAV14DV4A0A0A6YYC5 116 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 A0A1B0GTH9 108 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 PQLC2LA1A4F0 135 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OR52A4PA6NMU1 304 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 EEF1E1-BLOC1S5C9J1V9 151 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 PEX12O00623 359 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OR2T1O43869 369 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 SNAPINO95295 136 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 ACTL6AO96019 429 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 AMY2AP04746 511 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 RAB40ALP0C0E4 278 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OR4E1P0C645 316 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 HIST1H1CP16403 213 aaKnown RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 RAB28P51157 221 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 RAB5BP61020 215 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 IL10RAQ13651 578 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 TRIP6Q15654 476 aaKnown RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 PLEKHN1Q494U1 663 aaPredicted RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 WDR74Q6RFH5 385 aaPredicted RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 RHOUQ7L0Q8 258 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 KCTD9Q7L273 389 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 FAM122BQ7Z309 247 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OR10G6Q8NH81 332 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 IFI44Q8TCB0 444 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 PPP1R1CQ8WVI7 109 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 RAB40AQ8WXH6 277 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 CCDC74AQ96AQ1 378 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 MIB2Q96AX9 1013 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 NMNAT3Q96T66 252 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 PRSS27Q9BQR3 290 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 ULBP3Q9BZM4 244 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 AICDAQ9GZX7 198 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 HRH4Q9H3N8 390 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 BARX1Q9HBU1 254 aaPredicted RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OR2S2Q9NQN1 319 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 IKZF2Q9UKS7 526 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 SIGLEC7Q9Y286 467 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OTOGLQ3ZCN5 2332 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 C13orf42A0A1B0GVH6 325 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 TMEM82A0PJX8 343 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 NTN3O00634 580 aaPredicted RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 TOX3O15405 576 aaPredicted RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 DUX1O43812 170 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 HLA-AP01891 365 aaKnown RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 AKAIN1P0CW23 69 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OR8G3PP0DMU2 310 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 VAMP1P23763 118 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 MNDAP41218 407 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 RPS27P42677 84 aaKnown RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 ATP1B3P54709 279 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 NANOS3P60323 173 aaKnown RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 MRPS10P82664 201 aaKnown RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 GPR18Q14330 331 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 GLT8D1Q68CQ7 371 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 JMJD6Q6NYC1 403 aaPredicted RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 STAC2Q6ZMT1 411 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 ZNF627Q7L945 461 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OR52E1Q8NGJ3 308 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OR1J2Q8NGS2 313 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OR2L8Q8NGY9 312 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OR6S1Q8NH40 331 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 PHOSPHO1Q8TCT1 267 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 TMED6Q8WW62 240 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 PATE1Q8WXA2 126 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 SLC22A18Q96BI1 424 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 PTCHD1Q96NR3 888 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 LMF1Q96S06 567 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 MENTQ9BUN1 341 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 ACTRT3Q9BYD9 372 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 RHBGQ9H310 441 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 DLL3Q9NYJ7 618 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 RPH3AQ9Y2J0 694 aaPredicted RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 ZNF281Q9Y2X9 895 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 IER3IP1Q9Y5U9 82 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 MDC1Q14676 2089 aaKnown RBP7.35□□□□□ -1.23
LINC00954-202ENST00000449086 IGHV1OR21-1A0A087WYE8 117 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 A0A0B4J2A0 478 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 C4orf51C9J302 202 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 OGG1O15527 345 aa7.35□□□□□ -1.23
LINC00954-202ENST00000449086 SULT1B1O43704 296 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms