RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SNTB2Q13425 540 aaKnown RBP12.62□□□□□ -0.39
USP39-206ENST00000448971 RAB39AQ14964 217 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 SGCAQ16586 387 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 KRT80Q6KB66 452 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 C1orf94Q6P1W5 598 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 PGM2L1Q6PCE3 622 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 DPY19L2P2Q6ZN68 376 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 ZNF620Q6ZNG0 422 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 ADCK1Q86TW2 530 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 JAZF1Q86VZ6 243 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 OR4F15Q8NGB8 312 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 OR52L1Q8NGH7 329 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 OR4C15Q8NGM1 316 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 CANT1Q8WVQ1 401 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 IFT27Q9BW83 186 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 CHID1Q9BWS9 393 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 CACNG6Q9BXT2 260 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 CADM1Q9BY67 442 aaKnown RBP12.62□□□□□ -0.39
USP39-206ENST00000448971 RERGLQ9H628 205 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 CA10Q9NS85 328 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 POMPQ9Y244 141 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 UGT2A1Q9Y4X1 527 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 IER3IP1Q9Y5U9 82 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 PRSS37A4D1T9 235 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 OVOL3O00110 214 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 GSC2O15499 205 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 ZNF14P17017 642 aaPredicted RBP12.61□□□□□ -0.39
USP39-206ENST00000448971 NOS3P29474 1203 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 APOBEC3AP31941 199 aaPredicted RBP12.61□□□□□ -0.39
USP39-206ENST00000448971 GSSP48637 474 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 GALK2Q01415 458 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 HSF2Q03933 536 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 PLP2Q04941 152 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 SLC25A47Q6Q0C1 308 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 AQP11Q8NBQ7 271 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 MAPK1IP1LQ8NDC0 245 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 NUP37Q8NFH4 326 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 IL17RDQ8NFM7 739 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 FGFBP3Q8TAT2 258 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 NABP1Q96AH0 204 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 FBXO17Q96EF6 278 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 ERMAPQ96PL5 475 aaPredicted RBP12.61□□□□□ -0.39
USP39-206ENST00000448971 SYT4Q9H2B2 425 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 YY1AP1Q9H869 796 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 SIAEQ9HAT2 523 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 VNN3Q9NY84 501 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 SLC7A8Q9UHI5 535 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 CDH10Q9Y6N8 788 aa12.61□□□□□ -0.39
USP39-206ENST00000448971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.6□□□□□ -0.399e-10■■■■■ 32.2
USP39-206ENST00000448971 IQCMA0A1B0GVH7 501 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 SLC22A23A1A5C7 686 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 E2F6O75461 281 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 BMP4P12644 408 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 HOXB6P17509 224 aaKnown RBP12.6□□□□□ -0.39
USP39-206ENST00000448971 MSR1P21757 451 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 HMGA2P52926 109 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 SNRPD2P62316 118 aaKnown RBP12.6□□□□□ -0.39
USP39-206ENST00000448971 DAG1Q14118 895 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 RFX4Q33E94 735 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 CLEC12AQ5QGZ9 265 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 RPL13AP3Q6NVV1 102 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 SLC30A7Q8NEW0 376 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 OR10G2Q8NGC3 310 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 SAMD8Q96LT4 415 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 C1orf198Q9H425 327 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 EGLN3Q9H6Z9 239 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 CDH20Q9HBT6 801 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 TBC1D23Q9NUY8 699 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 SPEF1Q9Y4P9 236 aa12.6□□□□□ -0.39
USP39-206ENST00000448971 RNF223E7ERA6 249 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 AHCYL1O43865 530 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 MGRN1O60291 552 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 SLC16A7O60669 478 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 RENP00797 406 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 PTHP01270 115 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 CD8AP01732 235 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 SERPINA5P05154 406 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 APEHP13798 732 aaKnown RBP12.59□□□□□ -0.39
USP39-206ENST00000448971 CTLA4P16410 223 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 ZNF32P17041 273 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 LAP3P28838 519 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 CBX1P83916 185 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 GK3PQ14409 553 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 MICAQ29983 383 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 CLEC12BQ2HXU8 276 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 TBC1D28Q2M2D7 210 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 C11orf71Q6IPW1 123 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 LEG1Q6P5S2 330 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 DNM1P34Q6PK57 102 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 PTCHD4Q6ZW05 846 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 ZNF584Q8IVC4 421 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 PHC2Q8IXK0 858 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 ZNF75AQ96N20 296 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 FOXN4Q96NZ1 517 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 REG4Q9BYZ8 158 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 GRIP2Q9C0E4 1043 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 LRMDAQ9H2I8 198 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 ZNF442Q9H7R0 627 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 POLR1DQ9Y2S0 133 aa12.59□□□□□ -0.39
USP39-206ENST00000448971 TCRBV3S1A0A5B6 114 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms