RNA–Protein interactions for RNA: ENST00000445340.2

CDC40-205, Transcript of cell division cycle 40, humanhuman

TSL 5

Gene CDC40, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-205ENST00000445340 FAM210AQ96ND0 272 aa2.55□□□□□ -2
CDC40-205ENST00000445340 SERPINB12Q96P63 405 aa2.55□□□□□ -2
CDC40-205ENST00000445340 HIST1H4GQ99525 98 aa2.55□□□□□ -2
CDC40-205ENST00000445340 NAA50Q9GZZ1 169 aaKnown RBP2.55□□□□□ -2
CDC40-205ENST00000445340 UPF3AQ9H1J1 476 aaKnown RBP2.55□□□□□ -2
CDC40-205ENST00000445340 TMEM38AQ9H6F2 299 aa2.55□□□□□ -2
CDC40-205ENST00000445340 OR2S2Q9NQN1 319 aa2.55□□□□□ -2
CDC40-205ENST00000445340 CTPS2Q9NRF8 586 aa2.55□□□□□ -2
CDC40-205ENST00000445340 MCUBQ9NWR8 336 aa2.55□□□□□ -2
CDC40-205ENST00000445340 DPM3Q9P2X0 92 aa2.55□□□□□ -2
CDC40-205ENST00000445340 CTSZQ9UBR2 303 aa2.55□□□□□ -2
CDC40-205ENST00000445340 CLEC2DQ9UHP7 191 aa2.55□□□□□ -2
CDC40-205ENST00000445340 MRM2Q9UI43 246 aaKnown RBP2.55□□□□□ -2
CDC40-205ENST00000445340 FADS3Q9Y5Q0 445 aa2.55□□□□□ -2
CDC40-205ENST00000445340 V9GY05 133 aa2.55□□□□□ -2
CDC40-205ENST00000445340 V9GYY9 64 aa2.55□□□□□ -2
CDC40-205ENST00000445340 BRD4O60885 1362 aaPredicted RBP2.54□□□□□ -2
CDC40-205ENST00000445340 LRPPRCP42704 1394 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 USP42Q9H9J4 1324 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 IGHV1OR15-1A0A075B7D0 117 aa2.54□□□□□ -2
CDC40-205ENST00000445340 A0A0G2JRQ6 117 aa2.54□□□□□ -2
CDC40-205ENST00000445340 MGAT4DA6NG13 374 aa2.54□□□□□ -2
CDC40-205ENST00000445340 A8MXK9 166 aa2.54□□□□□ -2
CDC40-205ENST00000445340 ERVV-1B6SEH8 477 aa2.54□□□□□ -2
CDC40-205ENST00000445340 GOLGA8RI6L899 631 aa2.54□□□□□ -2
CDC40-205ENST00000445340 CDX4O14627 284 aaPredicted RBP2.54□□□□□ -2
CDC40-205ENST00000445340 ITGB1BP1O14713 200 aa2.54□□□□□ -2
CDC40-205ENST00000445340 TNFSF11O14788 317 aa2.54□□□□□ -2
CDC40-205ENST00000445340 RAD51BO15315 384 aa2.54□□□□□ -2
CDC40-205ENST00000445340 EMC8O43402 210 aa2.54□□□□□ -2
CDC40-205ENST00000445340 MPDU1O75352 247 aa2.54□□□□□ -2
CDC40-205ENST00000445340 KLHL2O95198 593 aa2.54□□□□□ -2
CDC40-205ENST00000445340 DUS4LO95620 317 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 TRIM49P0CI25 452 aa2.54□□□□□ -2
CDC40-205ENST00000445340 TRIM49CP0CI26 452 aa2.54□□□□□ -2
CDC40-205ENST00000445340 PSMC3P17980 439 aa2.54□□□□□ -2
CDC40-205ENST00000445340 PCK1P35558 622 aa2.54□□□□□ -2
CDC40-205ENST00000445340 BTDP43251 543 aa2.54□□□□□ -2
CDC40-205ENST00000445340 GPR6P46095 362 aaPredicted RBP2.54□□□□□ -2
CDC40-205ENST00000445340 DNASE1L1P49184 302 aa2.54□□□□□ -2
CDC40-205ENST00000445340 OR2B6P58173 313 aa2.54□□□□□ -2
CDC40-205ENST00000445340 TAS2R39P59534 338 aa2.54□□□□□ -2
CDC40-205ENST00000445340 ACTA2P62736 377 aa2.54□□□□□ -2
CDC40-205ENST00000445340 ACTG2P63267 376 aa2.54□□□□□ -2
CDC40-205ENST00000445340 ACTC1P68032 377 aa2.54□□□□□ -2
CDC40-205ENST00000445340 ACTA1P68133 377 aa2.54□□□□□ -2
CDC40-205ENST00000445340 IRX3P78415 501 aaPredicted RBP2.54□□□□□ -2
CDC40-205ENST00000445340 ZNF92Q03936 586 aa2.54□□□□□ -2
CDC40-205ENST00000445340 UNC119Q13432 240 aa2.54□□□□□ -2
CDC40-205ENST00000445340 GGTLC2Q14390 218 aa2.54□□□□□ -2
CDC40-205ENST00000445340 MAPRE2Q15555 327 aa2.54□□□□□ -2
CDC40-205ENST00000445340 ATP6V1FQ16864 119 aa2.54□□□□□ -2
CDC40-205ENST00000445340 LRRC36Q1X8D7 754 aa2.54□□□□□ -2
CDC40-205ENST00000445340 PTRHD1Q6GMV3 140 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 REG3GQ6UW15 175 aa2.54□□□□□ -2
CDC40-205ENST00000445340 TMIGD1Q6UXZ0 262 aa2.54□□□□□ -2
CDC40-205ENST00000445340 Q6ZN92 141 aa2.54□□□□□ -2
CDC40-205ENST00000445340 PRSS41Q7RTY9 318 aa2.54□□□□□ -2
CDC40-205ENST00000445340 PEX26Q7Z412 305 aa2.54□□□□□ -2
CDC40-205ENST00000445340 TMEM150AQ86TG1 271 aa2.54□□□□□ -2
CDC40-205ENST00000445340 ZNF546Q86UE3 836 aa2.54□□□□□ -2
CDC40-205ENST00000445340 HSD17B11Q8NBQ5 300 aa2.54□□□□□ -2
CDC40-205ENST00000445340 OR10G3Q8NGC4 313 aa2.54□□□□□ -2
CDC40-205ENST00000445340 OR2AP1Q8NGE2 309 aa2.54□□□□□ -2
CDC40-205ENST00000445340 OR6K6Q8NGW6 343 aa2.54□□□□□ -2
CDC40-205ENST00000445340 CCDC26Q8TAB7 109 aa2.54□□□□□ -2
CDC40-205ENST00000445340 VN1R17PQ8TDU5 208 aa2.54□□□□□ -2
CDC40-205ENST00000445340 ACOT11Q8WXI4 607 aaPredicted RBP2.54□□□□□ -2
CDC40-205ENST00000445340 CHCHD10Q8WYQ3 142 aaPredicted RBP2.54□□□□□ -2
CDC40-205ENST00000445340 ANP32BQ92688 251 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 LRRC45Q96CN5 670 aa2.54□□□□□ -2
CDC40-205ENST00000445340 CENPNQ96H22 339 aaPredicted RBP2.54□□□□□ -2
CDC40-205ENST00000445340 DNAJC1Q96KC8 554 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 ZNF597Q96LX8 424 aa2.54□□□□□ -2
CDC40-205ENST00000445340 ZNF396Q96N95 335 aaPredicted RBP2.54□□□□□ -2
CDC40-205ENST00000445340 FOXC2Q99958 501 aa2.54□□□□□ -2
CDC40-205ENST00000445340 RARRES2Q99969 163 aa2.54□□□□□ -2
CDC40-205ENST00000445340 PELOQ9BRX2 385 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 MED10Q9BTT4 135 aa2.54□□□□□ -2
CDC40-205ENST00000445340 RIOK2Q9BVS4 552 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 C20orf85Q9H1P6 137 aa2.54□□□□□ -2
CDC40-205ENST00000445340 OR51J1Q9H342 316 aa2.54□□□□□ -2
CDC40-205ENST00000445340 NXF3Q9H4D5 531 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 EML4Q9HC35 981 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 MRM3Q9HC36 420 aaKnown RBP2.54□□□□□ -2
CDC40-205ENST00000445340 PRR34Q9NV39 138 aa2.54□□□□□ -2
CDC40-205ENST00000445340 NECAP2Q9NVZ3 263 aa2.54□□□□□ -2
CDC40-205ENST00000445340 NKIRAS1Q9NYS0 192 aa2.54□□□□□ -2
CDC40-205ENST00000445340 SLC17A7Q9P2U7 560 aa2.54□□□□□ -2
CDC40-205ENST00000445340 GNPTGQ9UJJ9 305 aa2.54□□□□□ -2
CDC40-205ENST00000445340 PPIL1Q9Y3C6 166 aa2.54□□□□□ -2
CDC40-205ENST00000445340 PUS1Q9Y606 427 aaKnown RBP eCLIP2.54□□□□□ -2
CDC40-205ENST00000445340 ATRXP46100 2492 aa2.53□□□□□ -2
CDC40-205ENST00000445340 TRAV9-2A0A087WT02 112 aa2.53□□□□□ -2
CDC40-205ENST00000445340 C1orf232A0A0U1RR37 186 aa2.53□□□□□ -2
CDC40-205ENST00000445340 A0A1B0GTI1 187 aa2.53□□□□□ -2
CDC40-205ENST00000445340 A0A1B0GW55 424 aa2.53□□□□□ -2
CDC40-205ENST00000445340 TMEM213A2RRL7 107 aa2.53□□□□□ -2
CDC40-205ENST00000445340 A8MU10 97 aa2.53□□□□□ -2
CDC40-205ENST00000445340 F8VP50 259 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms