RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SAMD8Q96LT4 415 aa12.08□□□□□ -0.48
HMGN1-208ENST00000443046 ZNF347Q96SE7 839 aa12.08□□□□□ -0.48
HMGN1-208ENST00000443046 EVA1AQ9H8M9 152 aa12.08□□□□□ -0.48
HMGN1-208ENST00000443046 MSL2Q9HCI7 577 aa12.08□□□□□ -0.48
HMGN1-208ENST00000443046 SLCO1B3Q9NPD5 702 aa12.08□□□□□ -0.48
HMGN1-208ENST00000443046 C1RLQ9NZP8 487 aa12.08□□□□□ -0.48
HMGN1-208ENST00000443046 EIF3KQ9UBQ5 218 aaKnown RBP12.08□□□□□ -0.48
HMGN1-208ENST00000443046 IGHV3OR16-10A0A075B7F0 116 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 C5orf49A4QMS7 147 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 TRPC5OSA6NMA1 111 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 SRRM5B3KS81 715 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 RNF13O43567 381 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 CHP2O43745 196 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 CH25HO95992 272 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 NGFP01138 241 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 THY1P04216 161 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 WNT2P09544 360 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 ZNF32P17041 273 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 CPT2P23786 658 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 ZNF84P51523 738 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 RAG2P55895 527 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 TNFAIP6P98066 277 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-208ENST00000443046 CDK6Q00534 326 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 PSG4Q00888 419 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 HSF2Q03933 536 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 FBLN7Q53RD9 439 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 ZMAT1Q5H9K5 638 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 LRRN1Q6UXK5 716 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 UNQ6126/PRO20091Q6UXV3 157 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 POU5F2Q8N7G0 328 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 OR4F5Q8NH21 305 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 NMD3Q96D46 503 aaKnown RBP12.07□□□□□ -0.48
HMGN1-208ENST00000443046 CCT8L2Q96SF2 557 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 RBM4BQ9BQ04 359 aaKnown RBP12.07□□□□□ -0.48
HMGN1-208ENST00000443046 ZNF426Q9BUY5 554 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 NANSQ9NR45 359 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 OR5V1Q9UGF6 321 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 ZNF229Q9UJW7 825 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 LRCH1Q9Y2L9 728 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 UGT2A1Q9Y4X1 527 aa12.07□□□□□ -0.48
HMGN1-208ENST00000443046 CLPSL1A2RUU4 121 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 PRORSD1PA6NEY8 169 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 TIMM23O14925 209 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 CLRN1P58418 232 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 PPP1CBP62140 327 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 PSG7Q13046 419 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 NPTX1Q15818 432 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 DEFB112Q30KQ8 113 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 ESCO2Q56NI9 601 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 MTX3Q5HYI7 312 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 LRIF1Q5T3J3 769 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 GCNT6Q5T4J0 391 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 FAM205BPQ63HN1 556 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 SLC2A7Q6PXP3 512 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 Q6ZR03 302 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 RANBP3LQ86VV4 465 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-208ENST00000443046 HIPK4Q8NE63 616 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 NOXO1Q8NFA2 376 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 SLC19A3Q9BZV2 496 aa12.06□□□□□ -0.48
HMGN1-208ENST00000443046 IGHV2-70DA0A0C4DH43 119 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 CEACAM18A8MTB9 384 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 SNNO75324 88 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-208ENST00000443046 TRMUO75648 421 aaKnown RBP12.05□□□□□ -0.48
HMGN1-208ENST00000443046 SELEP16581 610 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 CDAP32320 146 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 MDH2P40926 338 aaKnown RBP12.05□□□□□ -0.48
HMGN1-208ENST00000443046 GDI2P50395 445 aaKnown RBP12.05□□□□□ -0.48
HMGN1-208ENST00000443046 UGT2B15P54855 530 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 CEP85LQ5SZL2 805 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 BRICD5Q6PL45 260 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 Q6YL49 198 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 GOLGA6L1Q8N7Z2 621 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 AKR7LQ8NHP1 331 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 ABHD4Q8TB40 342 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 RAB40AQ8WXH6 277 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 ASB10Q8WXI3 467 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 ZNF607Q96SK3 696 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 MCHR1Q99705 422 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 WNT5BQ9H1J7 359 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 TMEM38AQ9H6F2 299 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 SMURF2Q9HAU4 748 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 SLAMF8Q9P0V8 285 aa12.05□□□□□ -0.48
HMGN1-208ENST00000443046 TRBV5-3A0A0A0MS03 114 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 IGKV1D-43A0A0B4J1Z2 117 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 TRAV40A0A0B4J280 105 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 KIR2DS1A0A191URI9 304 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 TMEM178BH3BS89 294 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 SERPINB7O75635 380 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 CLPXO76031 633 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 TSPAN19P0C672 248 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 ACADSP16219 412 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 GPX2P18283 190 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 TNFRSF1AP19438 455 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 SCARB2Q14108 478 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 TNFAIP8L3Q5GJ75 292 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 ARMC4Q5T2S8 1044 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 FAM27BQ5VT28 67 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 NXNQ6DKJ4 435 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 TTC33Q6PID6 262 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-208ENST00000443046 FIP1L1Q6UN15 594 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms