RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CCDC54Q8NEL0 328 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 CHPT1Q8WUD6 406 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 ZNRF4Q8WWF5 429 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 CMTM3Q96MX0 182 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 NPAS1Q99742 590 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 NEK6Q9HC98 313 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 B3GAT1Q9P2W7 334 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 HHLA2Q9UM44 414 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 DHDHQ9UQ10 334 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 TNRC18O15417 2968 aaPredicted RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 ZNF878C9JN71 531 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 DHHO43323 396 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 NME2P1O60361 137 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 UPK3AO75631 287 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 KRT33AO76009 404 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 ABHD16AO95870 558 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 ACTL6AO96019 429 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 HPNP05981 417 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 QDPRP09417 244 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 MSR1P21757 451 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 SDHBP21912 280 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 NME2P22392 152 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 MEOX1P50221 254 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 LSM6P62312 80 aaKnown RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 GRB2P62993 217 aaKnown RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 SGCAQ16586 387 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 KIF26BQ2KJY2 2108 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 OR7E24Q6IFN5 339 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 SFXN4Q6P4A7 337 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 CREB3L2Q70SY1 520 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 ZNF227Q86WZ6 799 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 LRRC28Q86X40 367 aaPredicted RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 POC5Q8NA72 575 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 C19orf18Q8NEA5 215 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 RPS4Y2Q8TD47 263 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 UBL7Q96S82 380 aaPredicted RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 TIMP4Q99727 224 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 MRPL13Q9BYD1 178 aaKnown RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 BARHL1Q9BZE3 327 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 LDAHQ9H6V9 325 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 MRPL22Q9NWU5 206 aaKnown RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 PLEKHB1Q9UF11 243 aaPredicted RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 KLHDC2Q9Y2U9 406 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 GPR179Q6PRD1 2367 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 COL27A1Q8IZC6 1860 aaPredicted RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 A0A1B0GVI7 797 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 TRABD2BA6NFA1 517 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 ACOD1A6NK06 481 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 A6NL46 340 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 OR4C45A6NMZ5 311 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 MASP2O00187 686 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 PSMD9O00233 223 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 NPR2P20594 1047 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 APEX1P27695 318 aaKnown RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 PPIAP62937 165 aaKnown RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 FMODQ06828 376 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 DOC2BQ14184 412 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 SLC10A1Q14973 349 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 ZNF766Q5HY98 468 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 SPINK14Q6IE38 97 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 MZT2BQ6NZ67 158 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 RHOUQ7L0Q8 258 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 CENPSQ8N2Z9 138 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 RFLNBQ8N5W9 214 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 ZNF433Q8N7K0 673 aaPredicted RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 ABTB1Q969K4 478 aaPredicted RBP5.37□□□□□ -1.55
VPS50-205ENST00000441602 TMEM54Q969K7 222 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 MCHR2Q969V1 340 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 PPP1R14BQ96C90 147 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 SLAMF6Q96DU3 332 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 OR14A2Q96R54 314 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 ATF6BQ99941 703 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 WACQ9BTA9 647 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 NOX4Q9NPH5 578 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 ASCL3Q9NQ33 180 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 V9GY05 133 aa5.37□□□□□ -1.55
VPS50-205ENST00000441602 TRAV17A0A0B4J275 112 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 TRBV5-5A0A0J9YX44 114 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 PROB1E7EW31 1015 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 MAGEB4O15481 346 aaPredicted RBP5.36□□□□□ -1.55
VPS50-205ENST00000441602 NEURL1O76050 574 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 FARS2O95363 451 aaKnown RBP5.36□□□□□ -1.55
VPS50-205ENST00000441602 PTTG1O95997 202 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 P2RY4P51582 365 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 B3GALT5-AS1P59052 145 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 PCBD1P61457 104 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 IL18Q14116 193 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 PCK2Q16822 640 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 C10orf128Q5T292 105 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 HACD4Q5VWC8 232 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 GLT8D1Q68CQ7 371 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 Q6ZNX1 250 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SPATC1Q76KD6 591 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 FCRLAQ7L513 359 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 GALNTL5Q7Z4T8 443 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SULF2Q8IWU5 870 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 FAM109AQ8N4B1 249 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 OR10D3Q8NH80 312 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 RNF133Q8WVZ7 376 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 HAS2Q92819 552 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms