RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 ENTPD1P49961 510 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SUCLG1P53597 346 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CLDN15P56746 228 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ZNF846Q147U1 533 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TMEM176BQ3YBM2 270 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CDONQ4KMG0 1287 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TP53I3Q53FA7 332 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 C22orf42Q6IC83 251 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ARL9Q6T311 187 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SEM1Q6ZVN7 128 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SLC35D2Q76EJ3 337 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 GGNQ86UU5 652 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 OR6N2Q8NGY6 317 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SMAP2Q8WU79 429 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 BORCS5Q969J3 196 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 KLHL15Q96M94 604 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SLIRPQ9GZT3 109 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 C6orf62Q9GZU0 229 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 MMP27Q9H306 513 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SIAEQ9HAT2 523 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 HMG20AQ9NP66 347 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 GNG8Q9UK08 70 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SF3B6Q9Y3B4 125 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TMEM14AQ9Y6G1 99 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 A3GALT2U3KPV4 340 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 FLNBO75369 2602 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ICE1Q9Y2F5 2266 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 NCOA6Q14686 2063 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TVP23AA6NH52 213 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 E9PLN8 166 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 MS4A18H0YCH9 400 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SULT2B1O00204 365 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SLC16A7O60669 478 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 WDR1O75083 606 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 FZD7O75084 574 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PMS2P2O95744 297 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 IFNGR1P15260 489 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 OR12D2P58182 307 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PMPCAQ10713 525 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CDSNQ15517 529 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 MS4A18Q3C1V0 323 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PLEKHG7Q6ZR37 379 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SSX6Q7RTT6 188 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PXKQ7Z7A4 578 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 OR6V1Q8N148 313 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 KDM8Q8N371 416 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 RFLNBQ8N5W9 214 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ZNF511Q8NB15 262 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SSC4DQ8WTU2 575 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ZNRF4Q8WWF5 429 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ADAD1Q96M93 576 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TRIB1Q96RU8 372 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TM9SF2Q99805 663 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 VKORC1Q9BQB6 163 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 NAA11Q9BSU3 229 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 NUAK2Q9H093 628 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 KCNN2Q9H2S1 579 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 WDR76Q9H967 626 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 GALNT8Q9NY28 637 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CRNNQ9UBG3 495 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 LAMP5Q9UJQ1 280 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 COPS3Q9UNS2 423 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 B9D1Q9UPM9 204 aa12.92□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PHF3Q92576 2039 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SLC22A23A1A5C7 686 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CLDN25C9JDP6 229 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 GABRPO00591 440 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CDRT1O95170 752 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 IL1AP01583 271 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 KRT8P05787 483 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TACSTD2P09758 323 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 HLA-DOBP13765 273 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CPN1P15169 458 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 GALP22466 123 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 FGF9P31371 208 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 S100A5P33763 92 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 OPRL1P41146 370 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 RORCP51449 518 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 HCCSP53701 268 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CSNK2A1P68400 391 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 FABP5Q01469 135 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 RUNX1T1Q06455 604 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SLC3A1Q07837 685 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 LYPD4Q6UWN0 246 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TIGD4Q8IY51 512 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 OR6Q1Q8NGQ2 317 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 HAVCR2Q8TDQ0 301 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ITLN2Q8WWU7 325 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TRMT61AQ96FX7 289 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ZNF845Q96IR2 970 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TTYH2Q9BSA4 534 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 FANCFQ9NPI8 374 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SNTG1Q9NSN8 517 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TRAPPC4Q9Y296 219 aa12.91□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ARHGAP21Q5T5U3 1957 aa12.9□□□□□ -0.34
TNFRSF1A-204ENST00000440083 A1L4Q6 167 aa12.9□□□□□ -0.34
TNFRSF1A-204ENST00000440083 WIPF3A6NGB9 483 aa12.9□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CD8B2A6NJW9 211 aa12.9□□□□□ -0.34
TNFRSF1A-204ENST00000440083 AQP7P3A6NL99 342 aa12.9□□□□□ -0.34
TNFRSF1A-204ENST00000440083 DCTN6O00399 190 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms