RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 COL19A1Q14993 1142 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 TMEM196Q5HYL7 178 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 ETV3LQ6ZN32 361 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 SLC35F3Q8IY50 421 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF561Q8N587 486 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 PLPP7Q8NBV4 271 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 OR2L3Q8NG85 312 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 FGF11Q92914 225 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 FOXN4Q96NZ1 517 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 TSSK2Q96PF2 358 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 PLA2G2FQ9BZM2 168 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 C6orf106Q9H6K1 298 aaPredicted RBP6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 FN3KRPQ9HA64 309 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 PLEKHA1Q9HB21 404 aa6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 APOBEC3BQ9UH17 382 aaKnown RBP6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 ATXN7L1Q9ULK2 861 aaPredicted RBP6.75□□□□□ -1.33
SYNPO2-203ENST00000434046 H0Y8X5 98 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 H7C1Q1 480 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 BHLHE40O14503 412 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 NDUFB2O95178 105 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 CALCBP10092 127 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ABOP16442 354 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 MAOAP21397 527 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 NDUFA6P56556 154 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 FBXW4P57775 412 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 MRPS21P82921 87 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 EBPQ15125 230 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 OR2B11Q5JQS5 317 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 JMJD6Q6NYC1 403 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 USP53Q70EK8 1073 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 SKA3Q8IX90 412 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 PRSS58Q8IYP2 241 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 LRRC25Q8N386 305 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 CSNK1A1LQ8N752 337 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF565Q8N9K5 539 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 TEX19Q8NA77 164 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 LMX1AQ8TE12 382 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 RLN3Q8WXF3 142 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 RASD2Q96D21 266 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 Q96M85 177 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 PIGQQ9BRB3 760 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ALPK3Q96L96 1907 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 BRWD1Q9NSI6 2320 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 TMEM272A0A1B0GTI8 110 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 PIN1P1O15428 100 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 GATCO43716 136 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 SRPX2O60687 465 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF888P0CJ79 500 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 PVRP15151 417 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 GABRA3P34903 492 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 IGFALSP35858 605 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 DNASE1L1P49184 302 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 GPR143P51810 404 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 F2RL1P55085 397 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 PPP2CBP62714 309 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 PPP2CAP67775 309 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 HHEXQ03014 270 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 DUSP2Q05923 314 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 NNATQ16517 81 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 DEFB110Q30KQ9 67 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 Q3ZCU0 254 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ACER2Q5QJU3 275 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 LIPNQ5VXI9 398 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 DHRS7BQ6IAN0 325 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF529Q6P280 563 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 POMGNT2Q8NAT1 580 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ACBD4Q8NC06 268 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 OR4S1Q8NGB4 309 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 OR1E3Q8WZA6 343 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ZFYVE21Q9BQ24 234 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 PLSCR2Q9NRY7 297 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF275Q9NSD4 429 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 CD207Q9UJ71 328 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 TINAGQ9UJW2 476 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF346Q9UL40 294 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 SIGLEC7Q9Y286 467 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 URB1O60287 2271 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 NLRC5Q86WI3 1866 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 TRAV14DV4A0A0A6YYC5 116 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 CENPVL1A0A0U1RR11 272 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 RNASEK-C17orf49H0YIS7 233 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 H7C1C5 153 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 XRCC3O43542 346 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 TSPAN15O95858 294 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 DRD3P35462 400 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 EIF2S3P41091 472 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 RABIFP47224 123 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 EFNB2P52799 333 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 LCN6P62502 163 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 TRA2BP62995 288 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 PJVKQ0ZLH3 352 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 PLA2G7Q13093 441 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 FZD5Q13467 585 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 KIAA0141Q14154 515 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 KIR2DS3Q14952 304 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 SLC9A3R2Q15599 337 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 MPPED2Q15777 294 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 DUSP5Q16690 384 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF793Q6ZN11 406 aa6.74□□□□□ -1.33
SYNPO2-203ENST00000434046 SLC36A1Q7Z2H8 476 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms