RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PRKCDQ05655 676 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 TBC1D28Q2M2D7 210 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 ZNF774Q6NX45 483 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 CBLL1Q75N03 491 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 FAM122BQ7Z309 247 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 PCYOX1LQ8NBM8 494 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 ZNF540Q8NDQ6 660 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 OR1J1Q8NGS3 322 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 SYNPRQ8TBG9 265 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 RDH5Q92781 318 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 MARS2Q96GW9 593 aaKnown RBP10.03□□□□□ -0.8
HDAC4-202ENST00000430200 OR2H1Q9GZK4 316 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 MS4A5Q9H3V2 200 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 SIAEQ9HAT2 523 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 EMC7Q9NPA0 242 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 HINT3Q9NQE9 182 aaKnown RBP10.03□□□□□ -0.8
HDAC4-202ENST00000430200 FBXO9Q9UK97 447 aaPredicted RBP10.03□□□□□ -0.8
HDAC4-202ENST00000430200 SPEF1Q9Y4P9 236 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 PKD1L1Q8TDX9 2849 aa10.03□□□□□ -0.8
HDAC4-202ENST00000430200 C5orf49A4QMS7 147 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 SLC22A2O15244 555 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 SERPINA1P01009 418 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 AVPP01185 164 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 IGHV1-46P01743 117 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 IFNW1P05000 195 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 GAAP10253 952 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 ITGA2P17301 1181 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 CCNOP22674 350 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 LIMS1P48059 325 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 SLC9A3P48764 834 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 NUDT2P50583 147 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 DVL1P1P54792 670 aaPredicted RBP10.02□□□□□ -0.81
HDAC4-202ENST00000430200 HSF2Q03933 536 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 ST3GAL3Q11203 375 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 SEC23BQ15437 767 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 SGCAQ16586 387 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 THSD4Q6ZMP0 1018 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 ZNF771Q7L3S4 317 aaPredicted RBP10.02□□□□□ -0.81
HDAC4-202ENST00000430200 SLC25A40Q8TBP6 338 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 SLC7A13Q8TCU3 470 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 GEMIN6Q8WXD5 167 aaKnown RBP10.02□□□□□ -0.81
HDAC4-202ENST00000430200 RASD2Q96D21 266 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 Q96M85 177 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 GPA33Q99795 319 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 ALG12Q9BV10 488 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 ZNF416Q9BWM5 594 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 OR2J1Q9GZK6 312 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 GID8Q9NWU2 228 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 ABCD2Q9UBJ2 740 aa10.02□□□□□ -0.81
HDAC4-202ENST00000430200 TMEFF2Q9UIK5 374 aaPredicted RBP10.02□□□□□ -0.81
HDAC4-202ENST00000430200 IQCMA0A1B0GVH7 501 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 A0A1W2PPL8 197 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 EFCAB9A8MZ26 197 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 PPIHO43447 177 aaKnown RBP10.01□□□□□ -0.81
HDAC4-202ENST00000430200 ICMTO60725 284 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 DIRAS1O95057 198 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 GPANK1O95872 356 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 IGHV3-13P01766 116 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 CTLA4P16410 223 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 THBS2P35442 1172 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 MDH1P40925 334 aaKnown RBP10.01□□□□□ -0.81
HDAC4-202ENST00000430200 MVKQ03426 396 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 TRAM2Q15035 370 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 TSTQ16762 297 aaKnown RBP10.01□□□□□ -0.81
HDAC4-202ENST00000430200 IFI44LQ53G44 452 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 THEM4Q5T1C6 240 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 FAM27BQ5VT28 67 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 MBOAT2Q6ZWT7 520 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 USP51Q70EK9 711 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 FAM156AQ8NDB6 213 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 SEMA6DQ8NFY4 1073 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 RP9Q8TA86 221 aaKnown RBP10.01□□□□□ -0.81
HDAC4-202ENST00000430200 ACOT11Q8WXI4 607 aaPredicted RBP10.01□□□□□ -0.81
HDAC4-202ENST00000430200 SLC7A6Q92536 515 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 FAM46AQ96IP4 442 aaKnown RBP10.01□□□□□ -0.81
HDAC4-202ENST00000430200 FUZQ9BT04 418 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 MYLK2Q9H1R3 596 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 C1orf198Q9H425 327 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 POLE4Q9NR33 117 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 IL20RAQ9UHF4 553 aa10.01□□□□□ -0.81
HDAC4-202ENST00000430200 IGHV1-69-2A0A0G2JMI3 117 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 TEX13CA0A0J9YWL9 993 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 TRBV4-1A0A0J9YWV2 114 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 SLC22A23A1A5C7 686 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 VSTM5A8MXK1 200 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 RGS9O75916 674 aaPredicted RBP10□□□□□ -0.81
HDAC4-202ENST00000430200 MPZL1O95297 269 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 IFNA14P01570 189 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 MSMBP08118 114 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 CST2P09228 141 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 HNF1AP20823 631 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 ANOS1P23352 680 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 LSP1P33241 339 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 APLNRP35414 380 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 MRPS11P82912 194 aaKnown RBP10□□□□□ -0.81
HDAC4-202ENST00000430200 Q6ZR03 302 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 PTCHD4Q6ZW05 846 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 HDDC2Q7Z4H3 204 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 ARPINQ7Z6K5 226 aa10□□□□□ -0.81
HDAC4-202ENST00000430200 DPPA2Q7Z7J5 298 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms